Transcript Information: S_Transcript_4272.p1


Annotated TAIR IDAT5G55570.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22514587-22515260 | Reverse length=143
E-Value7.4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2672857731038
Replicate 20.52530451327416
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.25376009053549
Condition 3: 24 Hour
Replicate 10
Replicate 21.8886509646956
Replicate 30.90078730018272


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4272.p1 GENE.S_Transcript_4272~~S_Transcript_4272.p1 ORF type:5prime_partial len:84 (+),score=17.71 S_Transcript_4272:2-253(+)
GTTTCAACAGTAGATACTGCTCAAGCTCAAGTCACCTGGGAAATCATTGTTGGTGCTCTAGCTGGTGTAACGCCTTTTATTATTGCGGGAATTGAGTTCAGCAAAAGGATTGTAGCACAAAGAAGGTGCGAGGTGTGTGGAGGGTCAGGATTAGTTCTTCGAGACAAGAAGTACTACTTCAGGGGGGTTTCTTCCATGGCAGTCTTGGAAAAGATTCTTTTCTGGATGAAATTGCGTATGGAGACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4272.p1 GENE.S_Transcript_4272~~S_Transcript_4272.p1 ORF type:5prime_partial len:84 (+),score=17.71 S_Transcript_4272:2-253(+)
VSTVDTAQAQVTWEIIVGALAGVTPFIIAGIEFSKRIVAQRRCEVCGGSGLVLRDKKYYFRGVSSMAVLEKILFWMKLRMETS*

Click here to download the sequence:
Link to NCBI Protein BLAST