Transcript Information: S_Transcript_4277.p1


Annotated TAIR IDAT5G55570.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22514587-22515260 | Reverse length=143
E-Value1.8E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.717664722953
Replicate 212.513223928143
Replicate 310.18479455363
Condition 2: 8 Hour
Replicate 13.8194728926208
Replicate 24.6747146411369
Replicate 34.2949842189142
Condition 3: 24 Hour
Replicate 112.552656931162
Replicate 219.788551898751
Replicate 310.540555870795


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4277.p1 GENE.S_Transcript_4277~~S_Transcript_4277.p1 ORF type:3prime_partial len:134 (+),score=18.95 S_Transcript_4277:355-753(+)
ATGCAAATTCTTTCTTCTTTTTCCTATCCTCCAACAAATTGCCTCAAAAATAACAACAAATTGCCAACTATCAATTCCCATAATTTCCAAGCACTTAAACGAATTGTAAAGTTGAGGAGCAACACCAACCAATATTCCTTAAGAATTAGACAATTGGATGTGAAGGTGAAAGTGCTAAATGCTGTTTCAACAGTAGATACTGCTCAAGCTCAAGTCACCTGGGAAATCATTGTTGGTGCTCTAGCTGGTGTAACGCCTTTTATTATTGCGGGAATTGAGTTCAGCAAAAGGATTGTAGCACAAAGAAGGTGCGAGGTGTGTGGAGGGTCAGGATTAGTTCTTCGAGACAAGAAGTACTACTTCAGGTGCCCTAGCTGTGGGGGGTTTCTTCCATGGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4277.p1 GENE.S_Transcript_4277~~S_Transcript_4277.p1 ORF type:3prime_partial len:134 (+),score=18.95 S_Transcript_4277:355-753(+)
MQILSSFSYPPTNCLKNNNKLPTINSHNFQALKRIVKLRSNTNQYSLRIRQLDVKVKVLNAVSTVDTAQAQVTWEIIVGALAGVTPFIIAGIEFSKRIVAQRRCEVCGGSGLVLRDKKYYFRCPSCGGFLPWQ

Click here to download the sequence:
Link to NCBI Protein BLAST