Transcript Information: S_Transcript_42776.p1


Annotated TAIR IDAT5G64420.1
Annotated Gene NameDNA polymerase V family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25756416-25761122 | Forward length=1306
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.425738987294
Replicate 213.74628632867
Replicate 314.780043169801
Condition 2: 8 Hour
Replicate 114.133884080904
Replicate 214.635788829728
Replicate 313.247699679731
Condition 3: 24 Hour
Replicate 111.5859545616
Replicate 210.978886916268
Replicate 310.744905209968


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42776.p1 GENE.S_Transcript_42776~~S_Transcript_42776.p1 ORF type:complete len:1284 (+),score=366.13,DNA_pol_phi|PF04931.9|1.6e+04,DNA_pol_phi|PF04931.9|2.9e-182,DNA_pol_phi|PF04931.9|3.5e+02 S_Transcript_42776:802-4653(+)
ATGGGAAGCAAGAAAAAAGAAGTTAGTTCAATGGAGGTGGAGGAAGTAAATGTATTAGCTGAAGGTGGTGAATTTAATAATGGGACAAGTAAAAAGAAGGATTCCAAGAAGAAAAGGAGAAGGGATAAGAAAAATGATGATGGGGTTGATAATGAAGGTGGGAGTGATGCTCCATCAACCCCTACTCTGAGTTCGGTGAAACCTATGGAGAGGAGAAAGAAAAGGAAAATGTTGGATAAGGAGAGGCACAGGGTTGCTTTGGAGAGCAAGGAAACAAAGCTGGAACAACAAGAAAGTTCTATGGTGAAAAGCGACGAGGAAGGGGCAACAAGTGGTGCTAGTAATGGCGTGCCTGTGTTCCACATTGGTGTGTTTAGTGACTTGGCCTCAGCTGATGCCTCCAAAAGAGCGGCTGCTGCTGAGAGATCGGTGGTGGAGTTGCGGGATGTACAGAAGGCGTATGATGAGATGGAGACCAAGGAAGTTGGTGAAGGTGGGGTGCAGTTGGAAGCTGAGAAGGATGATGGTTTGGATGATTGTGCACCTTCAGTAAGATATGCTGTAAGAAGGCTTATTCGCGGTGTTTCTTCATCAAGAGAGTGTGCAAGACAAGGATTTGCATTGGGATTGACTCTTTTGATCAGTATAAATCATAAGATAAGGGTTACTTCGTTGCTAAAACTGATAGTTGATTCATTGGAGGTCTCCTCTTCAATGAAAGGCCAGGAAGCAAAGGATTCCCTTTTAGGCCGTCTTTTTGCCTATGGTGCCATTGTAAGATCTGGGAGACTAAGTGAAGAGTGGACTTCTGATAAGAATACTCCATACATCAAAGAGTTTACTAGTCATCTTATATCTCTTGCATCCAAAAGACAATACTTGCGAGACCCAGCTGTTGCAGTGCTTTTGAGCTTAATTGAATTTTTGCCCAAAGAAGCTGTGGTGAACCATATCCTTGAAGCTCCTGGACTTCATGAGTGGTTTGAAGGAGCCACTAATCCTGGGAATCCTGATGCTCTGCTTCTAGCGCTGAAAATTCGGGAAAAGATTGACATAGACAGTACTGTCTTTGGCCAGCTTCTGCCTCACCCATTTAGCTCTAGCAGGTTCTTCACTGTAAACCATTTGGCTTCCCTTGTTAGTTGCATGAAGGAATCTACATTTTGTCAGCCACGAGTTCATGGTATCTGGCCTCACCTGATCGACATTCTTTTACCTGATTCAGTCTTACAAGAGGCTAATTCTGCCTCAAGTTTGAATTCGACCAAAAAACAGAAGAGAAGTCGCAGATCTAGCTCTTCTGATGAAGATGTTTCAAAGAGCCTTAAGTGTTTTTGCGAGGTGATCCTTGAGGAATCCATTCTGACATCATCACATGATCGCAAACATTTAGTGTTTGATGTTTTGCTTCTGATGCTTCCAAGGCTACCAGCTTCATGTGTGCCAACTGTTCTCTCCCACAAGTTTGTTCAATGCCTCATGGATATACTGAAAACAAAGGACTCTTGGCTGCACAAAGTTGCTGAGCACTTTCTTAAAGAATTATCAGACTGGGTTGGATCTGATGACATTAGAAGAGTGTTTGTGGTTGTGGCGCTGCAGAAGCATAGTGGTGGGAGGTTTGATTCTATTACTAGGACAAAAACAATTAAAAATCTGATGGCAGGTTTCACAACTGAATCTGGTAGCATGTTGTTCATTCAAAAGTTGACTAGCATGTTCATTGATGAAGAGCATGCCGCAGATGAACCTTCAGATCAAAGCCAAACAACAGACGACAATGAGAATTCTGAGATGGGTGTTGAGGAAAAGGAGTCTTCTGGGAGCTCTGCTGATACTGATTTCATGAGTTGGGTTGTGGAATCGCTCCCAGGTGTCCTAAAGCATTTGACACTGGATCCTGAAGCAATGTTTCGGGTACAAAAGGAAGTTATGAAGTTCCTAGCTGTGCAGGGTCTATTTTCTGCTTCTCTTGGTACTGAAGTGACATCTTTTGAACTACAAGAAAAGTTTAGATGGCCAAAAGTACCGATTTCAAGTGCTCTTAGCAAGATGTGTATTGAGCAGCTTCAGTTATTACTTTCTATTGCTCAAAAAGCTGGGGGTCCTCTTGTTGTGTCAAACAACCTTGAGACAAATGACCTGGGTTATTACTTTATGCGCTTTCTTGGCACCTTATGCACCATTCCTTCTGTTTCCCTGGTACGGCCTTTGAGCAATGAGGATGAGAAGGCATTCAAGAAATTACAAGTCATGGAATCAAGGCTTTCTAAGGAGGAGAGAAATTATGAGGTTAGCAGTGAGGCTAATAAACTGCGTGTGTTGAGGTACCTGCTTATCCAAGTGCTGCTTCAGCTTCTCTTGCAGCCTGGAGAATTCTCTGAAGCTGCTTTGGAGCTTATAATATGTTGCCGTAAAGCATTTTCTGTGCATGATCTTCTTGAGTCTTCTGGGGAGGATGAATCTGAAGATGGTGAATCACCTGAGATGATGGAGGTTTTGGTTGACACACTGCTTTCATTGCTGCCCCAATCATCAGGTCCACTGAGGTCTTCTGTTGAACAGGTTTTTAAATACTTCTGTAGAAGTATTACCGATGATGGGTTGCTTCGGATGCTGCGGGTGATAAAGAAAGATTTAAAACCAGCTAGGCATAAGGATGCTAGTAGTGAAGATGACGACGACGATGATCTTCTAGGCATTGAAGAAGCTGAGGAGTCAGATGAAGATGACATGGTGGAGAGTGGTCAGACCAATGAACAAATGGATAACTCTAAGGCCCTATCTTCTGATGGTGGTGATGAGTCGGATGATGATGAATCAGATGACGATGATTCAGATGAAGACATGGATGATGATGCCATGTTTCGTATGGATGCCTATCTTACAAAGATTTTTCAGGAGCGCAAGAACCAAGCTGGGGGTGACACTGCGCATGCCCAACTTGTCCTTTTTAAGCTCCGTGTGCTTTCGTTGCTAGAAATTTTTCTTCATGAGAATGCAGAGTCGTCCAAGGTTCTGATTGTATATTCAAACTTGGTCCGAGCATTTGTAAATCCCAGTACTACTGAGGGTAGTGAGCAGCTTGCTCAACGCTTGTGGGGAATTTTGCAGAAGAAGATCTTCAAGGCAAAGGACTATCCCAAGGGAGAAGATGTTCAACTCTCTGCCTTGGAACCTCTGCTGGAGAAGAGCCTCCGATTAGCTTCCAGGCCGTTCAGGAAAAAGAAATCCACTGGTAATGTACCGCCAAAGAAAGAATCTTTCTCCAGGAACCGCTACAGAATGATTAACTCACTTGCTCAGCAATCAACTTATTGGATACTGAAGATTATTGACGGAAATAAATTTCCTGAGGCTGAACTCGATCGGATATTCGAGATTTTCAAGAATTCCCTGGTGAGTTACTTTAAAAACAAGAAGTGTCAACTGAAGCCAGAGTTCTTGAAGGAAGTTTTCAAGAGAAGGCCTCGGGTAGGGCACCATTGTTTTGAAACCCTTCTGGAAAGCTGTAGTGATGCGAAGTTTGATTATCGACGGGTGGAAGCTCTGGAATTAGTATTGGAAATATTGAAGTCACTCCAGGCAGAAAATGCTCCAGATAAATCAAAGAAGACTTTGAAGGGTCATTTGTCCAAAATGAGCCACTTGATAAAAGAACTGATAACAAATATGCCTGAAAAGCAGTCGAGACGGGCCGAAGTAAGGAAGTTTTGTGGTAAGGTCTTTCAGATATTATCTACCCACAGCTTGAGCAAAGCTTTTCTGAAAACCCTAGACCAGCAAGCTCTTACTGCTTGTGAATCTCAACTTGGTGATGCATTTCTTGTTTTGAAGAGAACCGAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42776.p1 GENE.S_Transcript_42776~~S_Transcript_42776.p1 ORF type:complete len:1284 (+),score=366.13,DNA_pol_phi|PF04931.9|1.6e+04,DNA_pol_phi|PF04931.9|2.9e-182,DNA_pol_phi|PF04931.9|3.5e+02 S_Transcript_42776:802-4653(+)
MGSKKKEVSSMEVEEVNVLAEGGEFNNGTSKKKDSKKKRRRDKKNDDGVDNEGGSDAPSTPTLSSVKPMERRKKRKMLDKERHRVALESKETKLEQQESSMVKSDEEGATSGASNGVPVFHIGVFSDLASADASKRAAAAERSVVELRDVQKAYDEMETKEVGEGGVQLEAEKDDGLDDCAPSVRYAVRRLIRGVSSSRECARQGFALGLTLLISINHKIRVTSLLKLIVDSLEVSSSMKGQEAKDSLLGRLFAYGAIVRSGRLSEEWTSDKNTPYIKEFTSHLISLASKRQYLRDPAVAVLLSLIEFLPKEAVVNHILEAPGLHEWFEGATNPGNPDALLLALKIREKIDIDSTVFGQLLPHPFSSSRFFTVNHLASLVSCMKESTFCQPRVHGIWPHLIDILLPDSVLQEANSASSLNSTKKQKRSRRSSSSDEDVSKSLKCFCEVILEESILTSSHDRKHLVFDVLLLMLPRLPASCVPTVLSHKFVQCLMDILKTKDSWLHKVAEHFLKELSDWVGSDDIRRVFVVVALQKHSGGRFDSITRTKTIKNLMAGFTTESGSMLFIQKLTSMFIDEEHAADEPSDQSQTTDDNENSEMGVEEKESSGSSADTDFMSWVVESLPGVLKHLTLDPEAMFRVQKEVMKFLAVQGLFSASLGTEVTSFELQEKFRWPKVPISSALSKMCIEQLQLLLSIAQKAGGPLVVSNNLETNDLGYYFMRFLGTLCTIPSVSLVRPLSNEDEKAFKKLQVMESRLSKEERNYEVSSEANKLRVLRYLLIQVLLQLLLQPGEFSEAALELIICCRKAFSVHDLLESSGEDESEDGESPEMMEVLVDTLLSLLPQSSGPLRSSVEQVFKYFCRSITDDGLLRMLRVIKKDLKPARHKDASSEDDDDDDLLGIEEAEESDEDDMVESGQTNEQMDNSKALSSDGGDESDDDESDDDDSDEDMDDDAMFRMDAYLTKIFQERKNQAGGDTAHAQLVLFKLRVLSLLEIFLHENAESSKVLIVYSNLVRAFVNPSTTEGSEQLAQRLWGILQKKIFKAKDYPKGEDVQLSALEPLLEKSLRLASRPFRKKKSTGNVPPKKESFSRNRYRMINSLAQQSTYWILKIIDGNKFPEAELDRIFEIFKNSLVSYFKNKKCQLKPEFLKEVFKRRPRVGHHCFETLLESCSDAKFDYRRVEALELVLEILKSLQAENAPDKSKKTLKGHLSKMSHLIKELITNMPEKQSRRAEVRKFCGKVFQILSTHSLSKAFLKTLDQQALTACESQLGDAFLVLKRTET*

Click here to download the sequence:
Link to NCBI Protein BLAST