Transcript Information: S_Transcript_42787.p1


Annotated TAIR IDAT5G46630.2
Annotated Gene NameClathrin adaptor complexes medium subunit family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18920580-18923060 | Forward length=441
E-Value2.9E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.282972210471
Replicate 238.496803647053
Replicate 341.926766768641
Condition 2: 8 Hour
Replicate 144.691022988069
Replicate 244.234087971031
Replicate 345.010912824186
Condition 3: 24 Hour
Replicate 137.021852658319
Replicate 233.247140444573
Replicate 332.805893747884


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42787.p1 GENE.S_Transcript_42787~~S_Transcript_42787.p1 ORF type:complete len:439 (+),score=79.64,Adap_comp_sub|PF00928.17|1.8e-88 S_Transcript_42787:308-1624(+)
ATGCCGGTGGCTGCTTCTGCTATTTACTTCTTGAATCTTCGTGGTGATGTTCTCATCAATCGCCTCTATCGCGATGATGTCGGGGGCAACATGGTTGATGCATTTCGAATGCACATTATGCAAACAAAGGAACTTGGTACGTGTCCTGTAAGGCAGATAGGAGGCTTATCCTTCCTTTATATGAGAATTAGCAATGTCTACATTGTAATTGTAGTCAGCAGCAATGCTAATGTAGCTTGTGCATTCAAGTTTGTTGTTGAGGCTGTTAATCTTTTCAAGTCTTACTTTGGTGGGCAATTTGATGAAGATGCCATTCGTAATAATTTTGTTCTGATATACGAGTTGTTAGATGAAATTATGGACTTCGGTTACCCACAAAATCTCTCCCCTGAAATTTTGAAGCTTTATATCACTCAAGAAGGAGTACGGTCACCATTCTCATCAAAGCCAACCGATAGACCCGTGCCGAATGCAACATTACAAGTTACAGGTGCTGTTGGCTGGCGAAGAGAAGGTCTTGTTTATAAAAAGAATGAGGTGTTCCTAGATATTGTGGAAAGTGTAAATCTTCTCATGTCTTCTAAAGGTAGTGTTCTGCGTTGTGATGTTACTGGAAAGATTCTCATGAAATGCTTTCTCTCTGGGATGCCTGATTTGAAGCTGGGATTGAATGATAAAATTGGCCTTGAGAAGGAGTCACAGTTAAAAGCACGTCCAACAAAAAGTGGGAAGACAATTGAGCTGGATGATGTAACCTTCCATCAGTGTGTAAACTTGACAAGGTTCAACTCGGAGAAGACTGTCAGTTTTGTGCCACCAGATGGTGAATTCGAATTAATGAAATACCGTATTACTGAGGGTGTCAATCTCCCGTTCCGGGTATTGCCAACAATAAAGGAATTGGGCAGGACACGTATGGAAGTGAATGTCAAGGTTAAGAGTGTCTTTGGAGCAAAGATGTTTGCCCTAGGAGTTGTAATCAAAATCCCAGTACCCAAACAAACTGCAAAAACAAGCTTTCAGGTGACATCTGGGAGAGCCAAGTATAATCCATCTATTGATAGCTTGGTCTGGAAGATAAGAAAGTTTCCTGGCCAGACCGAGTCAACCTTGAGTGCTGAAGTTGAGTTAATTTCTACCATGGGAGAGAAAAAATCCTGGACAAGACCACCAATCCAAATGGAATTCCAGGTCCCTATGTTCACAGCATCAGGCTTACGTGTTCGTTTCCTGAAGGTATGGGAGAAAAGTGGGTACAACACCGTTGAGTGGGTTCGTTATATCACAAAGGCTGGTTCATACGAGGTCAGGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42787.p1 GENE.S_Transcript_42787~~S_Transcript_42787.p1 ORF type:complete len:439 (+),score=79.64,Adap_comp_sub|PF00928.17|1.8e-88 S_Transcript_42787:308-1624(+)
MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGLSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVNLFKSYFGGQFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKARPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNPSIDSLVWKIRKFPGQTESTLSAEVELISTMGEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGSYEVRC*

Click here to download the sequence:
Link to NCBI Protein BLAST