Transcript Information: S_Transcript_42794.p1


Annotated TAIR IDAT1G56530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21179237-21180888 | Forward length=185
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3513429536152
Replicate 25.1968026795003
Replicate 34.6995408863993
Condition 2: 8 Hour
Replicate 16.3473859830439
Replicate 27.7127786530963
Replicate 35.6598824475753
Condition 3: 24 Hour
Replicate 16.2213479748373
Replicate 26.8428210541006
Replicate 35.886943983207


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42794.p1 GENE.S_Transcript_42794~~S_Transcript_42794.p1 ORF type:complete len:467 (+),score=134.79 S_Transcript_42794:520-1920(+)
ATGACGACCGCTCCAAGAAGGAAAAAGTGGAGTGAGGCAGAGGAAAGAACACTGCTTGACAAGTATGGAGAAATGGTTTCAAATGGGACATTGGCTAAGATGAAAACTAGGGAGAAAAAGTTTAGACCCATTGCTATTTATGTCAATTCTATGCATCATGTTAGGGACCCAATTGCATTTCCGTGGCAATGGAATTGGAAAGATGTGTCGACCAAGGTTCAAAACATGAGGCATCAATATTTGTTGGTTAAGCAAAAGATTAAGAAGCCTGAACCTTGTTCATTAGGGAGTGATTTGGAGGAGTTTGAGTGGGGGGATGGCCTCTCACATTGGTCTAATTTCCTTAGGTATAAAGAGGTCTTTGGGGATGTGCCTCTTGTGTTTAGTAATAACCATGATGATGGTTCCATGTTGGGGGGAGTTAATAATGAAGAGAATGGTGGTGGTTTTGATGGGAGTGGTCATGGGGTGGATATGGTAGATTTTGGGCACTTAGGTCACTCGGGGGAGGGGGATTTCGGCGCGGGGATTGATGGTGGTGAAGACGGGGTTTTGGGTTTGGGGGGTTTCGAATATGATCGAGAGGAGGGGGAGGAGAATTTCCATAATGGGAGCAACCATTTGAAGGAAGATGGTGATGAAGGGTTTGTGTATGAAGAAGTTGAGGCTAATGGGTCGGAGCTGAGGAAGAGGAGGAGAGGGAGCAAGGGGTTTGAGAAGAAGGCTTGGAGTTTTTTGGCAAATCAATTGGGGCAGTTGAGGGAAATGGAAACACGATTCGAGCATCGTGAGGCAGAACGGGAGCGAGAGAGGCAAAAGAGGGAGAATCTCCGTGTGGAGCATGAGAAAGAAAGGGATAAGATATGGGATGAGAGGGATAAAGAAAGAATGAAGAGGGAGAAGGTTATGGATGAGCTTAGGAAGCAAAGAGTGATGGAATTGGAGTCCATGGAGAAGGAGAGTGAAGAAAGGGAACGAAGAAGAAGGGAGGAACTGTTGATTCAAGAGAGGGAATGGGAAGAGAGGATGACTCGGAGGAGGTCCGAATGGAAGAAAAGAATGGATGAGATGGTAAGTCAGCATCGGGCAGAAATGGGTCAGATTCAGTCCCGCATTCTTCATGAGCAGCAAAATCTCACCAATCAGTTGCTTGCAATTGTGTCGCAATGGTCTGGTCACCCGAACGGTCTATCTGATCATACAGGAGCAAGCAGCCATTATCTATCGCAAATGATGCAAAATTTGCACCATGTGGGTGGCATGGTTCATGATGACACTAGGGTTGAAGGAGACAATCAGGATGATCATGATTCTTTTGCACCTTTTTGCAGCCGTAGCTCAAGACAGATCACTGAGATGAGTACTAGGAAGGATGTTTGCCGTGAAAAAGTGTGTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42794.p1 GENE.S_Transcript_42794~~S_Transcript_42794.p1 ORF type:complete len:467 (+),score=134.79 S_Transcript_42794:520-1920(+)
MTTAPRRKKWSEAEERTLLDKYGEMVSNGTLAKMKTREKKFRPIAIYVNSMHHVRDPIAFPWQWNWKDVSTKVQNMRHQYLLVKQKIKKPEPCSLGSDLEEFEWGDGLSHWSNFLRYKEVFGDVPLVFSNNHDDGSMLGGVNNEENGGGFDGSGHGVDMVDFGHLGHSGEGDFGAGIDGGEDGVLGLGGFEYDREEGEENFHNGSNHLKEDGDEGFVYEEVEANGSELRKRRRGSKGFEKKAWSFLANQLGQLREMETRFEHREAERERERQKRENLRVEHEKERDKIWDERDKERMKREKVMDELRKQRVMELESMEKESEERERRRREELLIQEREWEERMTRRRSEWKKRMDEMVSQHRAEMGQIQSRILHEQQNLTNQLLAIVSQWSGHPNGLSDHTGASSHYLSQMMQNLHHVGGMVHDDTRVEGDNQDDHDSFAPFCSRSSRQITEMSTRKDVCREKVCR*

Click here to download the sequence:
Link to NCBI Protein BLAST