Transcript Information: S_Transcript_42796.p1


Annotated TAIR IDAT1G56530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21179237-21180888 | Forward length=185
E-Value9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1250115086765
Replicate 22.674277522123
Replicate 32.165624312847
Condition 2: 8 Hour
Replicate 14.9274576111557
Replicate 24.4065762472189
Replicate 35.4097037482339
Condition 3: 24 Hour
Replicate 13.1443392903128
Replicate 22.4037375914308
Replicate 33.1527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42796.p1 GENE.S_Transcript_42796~~S_Transcript_42796.p1 ORF type:complete len:264 (+),score=79.88 S_Transcript_42796:524-1315(+)
ATGACAACCCCTCCAAGAAGGAAAAAGTGGAGTGAGGCAGAGGAAAGAACACTGCTTGACAAGTATGGAGAAATGGTTTCAAATGGGACATTGGCTAAGATGAAAACTAGGGAGAAAAAGTTTAGACCCATTGCTATTTATGTCAATTCTATGCATCATGTTAGGGACCCAATTGCATTTCCTTGGCAATGGACTTGGAAAGATGTGTCCACTAAGGTGCAAAACATGAGGCATCAATATTTGTTGGTTAAGCAAAAGATTAAGAAGCCTGAACCTTGTTCATTAGGGAGTGATTTGGAGGAGTTTGAGTGGGGGGATGGCCTCTCACATTGGTCTAATTTCCTTAGGTATAAAGAGGTCTTTGGGGATGTGCCTCTTGTGTTTAGTAATAACCATGATGATGGTTCCATGTTGGGGGGAGTTAATAATGAAGAGAATGGTGGTGGTTTTGATGGGAGTGGTCATGGGGTGGATATGGTAGATTTTGGGCACTTAGGTCACTCGGGGGAGGGGGATTTCGGCGCGGGGATTGATGGTGGTGAAGACGGGGTTTTGGGTTTGGGGGGTTTCGAATATGATCGAGAGGAGGGGGAGGAGAATTTCCATAATGGGAGCAACCATTTGAAGGAAGATGGTGATGAAGGGTTTGTGTATGAAGAAGTTGAGGCTAATGGGTCGGAGCTGAGGAAGAGGAGGAGAGGGAGCAAGGGGTTTGAGAAGAAGGCTTGGAGTTTTTTTGGCAAATCAATTGGGGCAGTTGAGGGAAATGGAAACACGATTCGAGCATCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42796.p1 GENE.S_Transcript_42796~~S_Transcript_42796.p1 ORF type:complete len:264 (+),score=79.88 S_Transcript_42796:524-1315(+)
MTTPPRRKKWSEAEERTLLDKYGEMVSNGTLAKMKTREKKFRPIAIYVNSMHHVRDPIAFPWQWTWKDVSTKVQNMRHQYLLVKQKIKKPEPCSLGSDLEEFEWGDGLSHWSNFLRYKEVFGDVPLVFSNNHDDGSMLGGVNNEENGGGFDGSGHGVDMVDFGHLGHSGEGDFGAGIDGGEDGVLGLGGFEYDREEGEENFHNGSNHLKEDGDEGFVYEEVEANGSELRKRRRGSKGFEKKAWSFFGKSIGAVEGNGNTIRAS*

Click here to download the sequence:
Link to NCBI Protein BLAST