Transcript Information: S_Transcript_42807.p1


Annotated TAIR IDAT4G37460.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)SRFR1
Annotation TypeOrtholog
Chromosome Positionchr4:17608623-17615534 | Reverse length=1052
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.691573584317
Replicate 213.220587353438
Replicate 313.497297656536
Condition 2: 8 Hour
Replicate 115.834050700136
Replicate 217.174129691484
Replicate 315.434902234778
Condition 3: 24 Hour
Replicate 113.597541224058
Replicate 212.088828827268
Replicate 312.159320536058


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42807.p1 GENE.S_Transcript_42807~~S_Transcript_42807.p1 ORF type:complete len:1033 (+),score=244.57,TPR_1|PF00515.24|4.1e-05,TPR_1|PF00515.24|2.3,TPR_1|PF00515.24|73,TPR_1|PF00515.24|2.5e-05,TPR_1|PF00515.24|4.5e-05,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|0.0024,TPR_1|PF00515.24|3.6,TPR_1|PF00515.24|0.0043,TPR_1|PF00515.24|0.00044,TPR_11|PF13414.2|2.6e-06,TPR_11|PF13414.2|58,TPR_11|PF13414.2|7.2e-08,TPR_11|PF13414.2|5.4e-09,TPR_11|PF13414.2|0.0009,TPR_11|PF13414.2|9.3e-10,TPR_11|PF13414.2|8.6e-07,TPR_11|PF13414.2|0.0036,TPR_2|PF07719.13|0.48,TPR_2|PF07719.13|1,TPR_2|PF07719.13|25,TPR_2|PF07719.13|0.0011,TPR_2|PF07719.13|0.00041,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|0.99,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|4,TPR_2|PF07719.13|0.0022,TPR_8|PF13181.2|8.8e+02,TPR_8|PF13181.2|0.33,TPR_8|PF13181.2|9.4e+02,TPR_8|PF13181.2|0.71,TPR_8|PF13181.2|0.55,TPR_8|PF13181.2|1.8,TPR_8|PF13181.2|3.3,TPR_8|PF13181.2|3.2,TPR_8|PF13181.2|1.1,TPR_8|PF13181.2|0.08,TPR_16|PF13432.2|1.8e+03,TPR_16|PF13432.2|0.087,TPR_16|PF13432.2|0.022,TPR_16|PF13432.2|2.1e-06,TPR_16|PF13432.2|1.2,TPR_16|PF13432.2|3.5,TPR_16|PF13432.2|0.43,TPR_17|PF13431.2|0.042,TPR_17|PF13431.2|6.6,TPR_17|PF13431.2|0.31,TPR_17|PF13431.2|0.32,TPR_17|PF13431.2|5.6,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.12,TPR_17|PF13431.2|40,TPR_12|PF13424.2|0.0007,TPR_12|PF13424.2|0.0094,TPR_12|PF13424.2|2,TPR_12|PF13424.2|0.00022,TPR_12|PF13424.2|0.0046,TPR_12|PF13424.2|0.002,TPR_9|PF13371.2|0.2,TPR_9|PF13371.2|26,TPR_9|PF13371.2|0.25,TPR_9|PF13371.2|0.014,TPR_9|PF13371.2|0.06,TPR_9|PF13371.2|0.0055,TPR_9|PF13371.2|4.4,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|48,TPR_14|PF13428.2|18,TPR_14|PF13428.2|0.056,TPR_14|PF13428.2|0.015,TPR_14|PF13428.2|45,TPR_14|PF13428.2|0.33,TPR_14|PF13428.2|8.4e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|1.2,TPR_19|PF14559.2|2.6e+03,TPR_19|PF14559.2|66,TPR_19|PF14559.2|0.00018,TPR_19|PF14559.2|2.6,TPR_19|PF14559.2|0.59,TPR_19|PF14559.2|0.22,ANAPC3|PF12895.3|0.0018,ANAPC3|PF12895.3|2.4e+02,ANAPC3|PF12895.3|26,ANAPC3|PF12895.3|59,ANAPC3|PF12895.3|0.0033,TPR_7|PF13176.2|45,TPR_7|PF13176.2|4.1e+03,TPR_7|PF13176.2|6.7e+02,TPR_7|PF13176.2|8.8e+03,TPR_7|PF13176.2|5.5e+02,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|57,TPR_7|PF13176.2|1,TPR_7|PF13176.2|2,TPR_7|PF13176.2|5.8e+03,TPR_7|PF13176.2|0.54,TPR_6|PF13174.2|2.3e+02,TPR_6|PF13174.2|5.1e+02,TPR_6|PF13174.2|3.6e+03,TPR_6|PF13174.2|39,TPR_6|PF13174.2|40,TPR_6|PF13174.2|1.1e+04,TPR_6|PF13174.2|7.9e+02,TPR_6|PF13174.2|35,TPR_6|PF13174.2|9.1 S_Transcript_42807:309-3407(+)
ATGGCGGCCGAGAGATTGGAGCTTGCGAAGCTCTGTAGCTCTCGGAACTGGTCAAAGGCCATTCGCATTCTTGATTCTCTTCTTGCTCGCTCTTCCTCCATTCAAGACCTCTGCAATCGAGCGTTCTGTTACAGTCAATTGGAGCTACACAAGCATGTGATCAAGGATTGTGATCGAGCTCTTGAACTTGATCCCGGTCTCCTTCAAGCTTACATTCTTCAAGGTCATGCATATGCTCATTTGGGAAGGAAAGATGATGCTATCTTGGTCTGGAAGCAAGGTTATGACCAGGCTCTAAGTCAGTCTGCAGATTTGAAGCAATTATTAGAATTGGAAGAGCTGCTGGCAAAGGAGAATGCAAATGCAAATGGAAATATAAATCCAGAGCAGCATCCTATGGAGCTTAATGCATCATCATCTGCACCACAAACAGTCCCAGAAAGCCACAGTGTCAGTGATTCTGAAACTTCAAAGGATCATAGTAAGATTAGTGATGATGTTGAAACCAGCAGTGAATTTGATGCTACATCCATGGTTCAGAGCAAATTGGTGCATGAATCTCATGTGCAGAATGGGTCAGTGGAAAAGGTGAAGGAAACTAGAAAGTTTGAAAGCAAATCAAATGGTGCTTATAAAAAGTTGAGCAGTGAGTTGGAATCACACAGCAAGCCAAGTGATGAACCACGCAATAAAAGCAACATGCCTAAGCTTCCCAGCAAGTCGACCAGCAAATCTTCTGAAGAATTTGAGTGGGCAGACGCCATAAAAAAGAATCAGAAAGTTTGTGTTGCTCGGATTTCAAAAACTAAATCAATAAGCTTAGATTTTCGGTTATCAAGGGGAATAGCTGAGGTAAATGAGGGAAGGTACACACATGCAATATCCATTTTTGACCAGATATTGAAAGAGGATTCAAATTATCCAGAGGCATTGATCGGAAGAGGGACAGCATATGCATTCCAACGAGAACTTGATGCTGCAATTGCTGATTTTACCAAGGCTATAGAGGCAAACCCATTAGCTGGTGAGGCATGGAAACGCAGAGGGCAAGCACGAGCTGCTTTGGGAGACTCTGCTGGGGCTATTGATGACTTGACAAAGGCATTGGAGTTTGAACCTAATTCATCAGACATACTGCATGAGAGGGGAATTGTTAATTTCAAATTCAAGGATTTTGACGCAGCTGTTAAAGACCTTTCTGCCTGTGTAAAGCTTGACAGGGCCAACAAGTCTGCATACACTTATTTGGGTCTGTCTTTATCTTCAGTTGGTGAATACAAGAAAGCCGAGGAATCACATATGAAAGCACTTCAATTTGATGGTGATTTCCTTGAGGCATGGACTCATCTTACGCAGCTTTATCAAGATTTGGCAAATACAACTAAGGCCTTTGACTGTCTTACACGGGTTCTAGAGATTGACAGCAGGTATTCAAAAGCATACTACTTGCGTGGACTGCTTAACCATGCGATGGGAGATCACAGGAATGCCATCAAGGATCTGTCCATGTCGCTAAGTATTGAGACCCCCAATGTGGAATGTTTGTATTTGAGAGCATCCTGTCACCATGCTATAGGACAATTTAGAGAAGCGGTCAAAGATTATGATGCTGCTTTAGATTTGGAATTAGACTCTATGGAGAAGTTTGTGCTTCAGTGTCTTGCGTTTTACCAGAAAGAAATAGCTCTCTATACGGCATCAAAAATTCACAGTGAGTTTTCCTGGTTCGACATTGATGACGACATTGACCCCATTTTTAAGGAGTATTGGTGCAAAAGATTGCATCCCAAGGATGTATGTGAAAAGGTGTACAGGCAACCTCCATTGCGTGAATCCCTGAAAAAGGGTAAGCTCAGGAAGCAAGACTTTGCAATGACAAAGCAGAAGACTGCTCTTCTTCATGCTGCAGACTCAATTGGACAAAAGATCCAGTACCATTGTCCAGGCTTCTTGTCCAACAAACGTCAGCATCGCATGGCGGGATTGGCTGCCATTGAAATAGCCCAAAAGGTTTCAAAGGCTTGGCGTGCTTTGCAAGCAGAATCGAAGCATTCTGGTAAAGGGATAGCAAAATATGGCAGGAGAGCTCGCAGAAAAGAAAGTGTAAACATGCCTAGTCAGAACAGAGGTGGTCCAGGTTGCAGTACAAGCAGCTCACCAGATACTTCAACATCATATGGGTTTCCAGAAGATAGATCATCTGCTCGTCCTATGATGTCATGGCAAGATGTGTATTCCCTGGCTGTGAAGTGGAGACAAATTTCTGAACCTTGTGATCCTGTTGTGTGGATTAACAGGTTGAGTGAAGAGTTCAATGCTGGATTTGGCTCTCATACTCCACTGATTCTTGGACAAGCAAAAGTTGTCCGCTACTTCCCCAATTTTCGTAGAACATTCGATGCTGCTAAGGCTGTCATAAAGGAAAAGAAGTATGCATGCAGCAAGACAGATGCTGTTATCAACCTATCTGATGAGAGAAAGTTGCAAGATATTATGCATGCCGAATCCTGCTCTGATCTCTACAGAAGTGTTGGGGAGGACTTCTGGGTGGCGACTTGGTGCAACAGTTTGGCATTTGAGGGGAAGCAGTTGGAGGGGACAAGAATTACCCTCTTAAAATCGGGAGAACGTGGGTTTGATTTTGCAATTAGAACTCCCTGTACACCTTCTAGGTGGAATGAGTTTGAGACAGAAATGGCAATGGCATGGGAGGCTCTCTGCCATGCTTATTGTAGCGAAGCTTATGGTTCTACTGATTTCAATGCCCTTGAGAATATCAGAGATGCAATTTTAAGGATGACGTACTACTGGTATAATTTTATGCCCCTATCTAGAGGTTCTGCAGCGGTTGGGTTTGTGGTTTTGCTTGGATTATTTCTTGCAGCAAATATGGAGATCACTGGGAGTATTCCACAAGGAGTGCAAGTGGACTGGGAAGCAATCCTTACTTTTGATCCAGATTCCTTCGTGAATTCTGTAAAGAAATGGTTGTATCCCTGTCTTAAGGTGACTACATCTTGGAAAGACTTTCCTGATGTTGCATCAACCTTGTCAACAACAGGATCTGTCATAGCTGCTCTCAGCTCTTACAATAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42807.p1 GENE.S_Transcript_42807~~S_Transcript_42807.p1 ORF type:complete len:1033 (+),score=244.57,TPR_1|PF00515.24|4.1e-05,TPR_1|PF00515.24|2.3,TPR_1|PF00515.24|73,TPR_1|PF00515.24|2.5e-05,TPR_1|PF00515.24|4.5e-05,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|0.0024,TPR_1|PF00515.24|3.6,TPR_1|PF00515.24|0.0043,TPR_1|PF00515.24|0.00044,TPR_11|PF13414.2|2.6e-06,TPR_11|PF13414.2|58,TPR_11|PF13414.2|7.2e-08,TPR_11|PF13414.2|5.4e-09,TPR_11|PF13414.2|0.0009,TPR_11|PF13414.2|9.3e-10,TPR_11|PF13414.2|8.6e-07,TPR_11|PF13414.2|0.0036,TPR_2|PF07719.13|0.48,TPR_2|PF07719.13|1,TPR_2|PF07719.13|25,TPR_2|PF07719.13|0.0011,TPR_2|PF07719.13|0.00041,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|0.99,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|4,TPR_2|PF07719.13|0.0022,TPR_8|PF13181.2|8.8e+02,TPR_8|PF13181.2|0.33,TPR_8|PF13181.2|9.4e+02,TPR_8|PF13181.2|0.71,TPR_8|PF13181.2|0.55,TPR_8|PF13181.2|1.8,TPR_8|PF13181.2|3.3,TPR_8|PF13181.2|3.2,TPR_8|PF13181.2|1.1,TPR_8|PF13181.2|0.08,TPR_16|PF13432.2|1.8e+03,TPR_16|PF13432.2|0.087,TPR_16|PF13432.2|0.022,TPR_16|PF13432.2|2.1e-06,TPR_16|PF13432.2|1.2,TPR_16|PF13432.2|3.5,TPR_16|PF13432.2|0.43,TPR_17|PF13431.2|0.042,TPR_17|PF13431.2|6.6,TPR_17|PF13431.2|0.31,TPR_17|PF13431.2|0.32,TPR_17|PF13431.2|5.6,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.12,TPR_17|PF13431.2|40,TPR_12|PF13424.2|0.0007,TPR_12|PF13424.2|0.0094,TPR_12|PF13424.2|2,TPR_12|PF13424.2|0.00022,TPR_12|PF13424.2|0.0046,TPR_12|PF13424.2|0.002,TPR_9|PF13371.2|0.2,TPR_9|PF13371.2|26,TPR_9|PF13371.2|0.25,TPR_9|PF13371.2|0.014,TPR_9|PF13371.2|0.06,TPR_9|PF13371.2|0.0055,TPR_9|PF13371.2|4.4,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|48,TPR_14|PF13428.2|18,TPR_14|PF13428.2|0.056,TPR_14|PF13428.2|0.015,TPR_14|PF13428.2|45,TPR_14|PF13428.2|0.33,TPR_14|PF13428.2|8.4e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|1.2,TPR_19|PF14559.2|2.6e+03,TPR_19|PF14559.2|66,TPR_19|PF14559.2|0.00018,TPR_19|PF14559.2|2.6,TPR_19|PF14559.2|0.59,TPR_19|PF14559.2|0.22,ANAPC3|PF12895.3|0.0018,ANAPC3|PF12895.3|2.4e+02,ANAPC3|PF12895.3|26,ANAPC3|PF12895.3|59,ANAPC3|PF12895.3|0.0033,TPR_7|PF13176.2|45,TPR_7|PF13176.2|4.1e+03,TPR_7|PF13176.2|6.7e+02,TPR_7|PF13176.2|8.8e+03,TPR_7|PF13176.2|5.5e+02,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|57,TPR_7|PF13176.2|1,TPR_7|PF13176.2|2,TPR_7|PF13176.2|5.8e+03,TPR_7|PF13176.2|0.54,TPR_6|PF13174.2|2.3e+02,TPR_6|PF13174.2|5.1e+02,TPR_6|PF13174.2|3.6e+03,TPR_6|PF13174.2|39,TPR_6|PF13174.2|40,TPR_6|PF13174.2|1.1e+04,TPR_6|PF13174.2|7.9e+02,TPR_6|PF13174.2|35,TPR_6|PF13174.2|9.1 S_Transcript_42807:309-3407(+)
MAAERLELAKLCSSRNWSKAIRILDSLLARSSSIQDLCNRAFCYSQLELHKHVIKDCDRALELDPGLLQAYILQGHAYAHLGRKDDAILVWKQGYDQALSQSADLKQLLELEELLAKENANANGNINPEQHPMELNASSSAPQTVPESHSVSDSETSKDHSKISDDVETSSEFDATSMVQSKLVHESHVQNGSVEKVKETRKFESKSNGAYKKLSSELESHSKPSDEPRNKSNMPKLPSKSTSKSSEEFEWADAIKKNQKVCVARISKTKSISLDFRLSRGIAEVNEGRYTHAISIFDQILKEDSNYPEALIGRGTAYAFQRELDAAIADFTKAIEANPLAGEAWKRRGQARAALGDSAGAIDDLTKALEFEPNSSDILHERGIVNFKFKDFDAAVKDLSACVKLDRANKSAYTYLGLSLSSVGEYKKAEESHMKALQFDGDFLEAWTHLTQLYQDLANTTKAFDCLTRVLEIDSRYSKAYYLRGLLNHAMGDHRNAIKDLSMSLSIETPNVECLYLRASCHHAIGQFREAVKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIHSEFSWFDIDDDIDPIFKEYWCKRLHPKDVCEKVYRQPPLRESLKKGKLRKQDFAMTKQKTALLHAADSIGQKIQYHCPGFLSNKRQHRMAGLAAIEIAQKVSKAWRALQAESKHSGKGIAKYGRRARRKESVNMPSQNRGGPGCSTSSSPDTSTSYGFPEDRSSARPMMSWQDVYSLAVKWRQISEPCDPVVWINRLSEEFNAGFGSHTPLILGQAKVVRYFPNFRRTFDAAKAVIKEKKYACSKTDAVINLSDERKLQDIMHAESCSDLYRSVGEDFWVATWCNSLAFEGKQLEGTRITLLKSGERGFDFAIRTPCTPSRWNEFETEMAMAWEALCHAYCSEAYGSTDFNALENIRDAILRMTYYWYNFMPLSRGSAAVGFVVLLGLFLAANMEITGSIPQGVQVDWEAILTFDPDSFVNSVKKWLYPCLKVTTSWKDFPDVASTLSTTGSVIAALSSYNN*

Click here to download the sequence:
Link to NCBI Protein BLAST