Transcript Information: S_Transcript_428087.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49743927542393
Replicate 20.9278743271852
Replicate 30.86181009736451
Condition 2: 8 Hour
Replicate 10
Replicate 21.359037534189
Replicate 30.99606764509259
Condition 3: 24 Hour
Replicate 10.91871005334275
Replicate 20.74133963100202
Replicate 31.4143202470159


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_428087.p1 GENE.S_Transcript_428087~~S_Transcript_428087.p1 ORF type:complete len:214 (+),score=31.78,Myb_DNA-bind_3|PF12776.3|2.7e-16 S_Transcript_428087:379-1020(+)
ATGGCCAATGATGAAAGGGAAATGGAAGTAAGCGATGGACAAAGAAATACTGAATCAAAGTCAAGGAAAGGGAATTTCATTTGGACGGATGCGTATGTTAAGATTTTTTGCAACATTTTATTGGAATTTCAGATGAAGTATGGTAAAAGTACGAAATATAAATGGTCTGCAATCCAACAAGATTTTGAACAAAGGACCAATAAAATATGTACTAATGTAAATTGTTGCAAGAACAAAATTGATACAATGAGGAAGGACTGGAACTCTTGGAAAGGATTAAAGAGAGGGGAAACTGGTCTAGGATGGGATCATGCAAGTGGTAGAATATCTGCTTCTAAGGAATGGTGGGACAAAAAAATCAAGGAAGATCCTAATTGCAGAAAGTTCCAAGATAAAGGAGTGTGTCATGAGATAGAAGATCTATGGGATAGATTATTTGCGGATACAGTGACAACAGGGGTGAATTGTGTAACCCCATATATGGATCCTCCAAGTATCAATAGGTCACAAGATGTGACTGTGAAGAATGTGTATATACCCGTATATGATAACCCTAATATAGATGAAGATATTACCAATGATGTTTATCCACAAAACACCCAATACTCTTCACCTTTGGATATGGAAGAGTTAGAGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_428087.p1 GENE.S_Transcript_428087~~S_Transcript_428087.p1 ORF type:complete len:214 (+),score=31.78,Myb_DNA-bind_3|PF12776.3|2.7e-16 S_Transcript_428087:379-1020(+)
MANDEREMEVSDGQRNTESKSRKGNFIWTDAYVKIFCNILLEFQMKYGKSTKYKWSAIQQDFEQRTNKICTNVNCCKNKIDTMRKDWNSWKGLKRGETGLGWDHASGRISASKEWWDKKIKEDPNCRKFQDKGVCHEIEDLWDRLFADTVTTGVNCVTPYMDPPSINRSQDVTVKNVYIPVYDNPNIDEDITNDVYPQNTQYSSPLDMEELER*

Click here to download the sequence:
Link to NCBI Protein BLAST