Transcript Information: S_Transcript_428088.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2578374997453
Replicate 22.1093623091164
Replicate 31.8109146542037
Condition 2: 8 Hour
Replicate 16.2818979228764
Replicate 27.6307080631626
Replicate 38.4271955647601
Condition 3: 24 Hour
Replicate 12.6529961861962
Replicate 22.5182012862608
Replicate 37.4297495146854


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_428088.p1 GENE.S_Transcript_428088~~S_Transcript_428088.p1 ORF type:complete len:387 (+),score=65.58,Myb_DNA-bind_3|PF12776.3|9.1e-16,Myb_DNA-bind_3|PF12776.3|2e+02 S_Transcript_428088:379-1539(+)
ATGGCCAATGATGAAAGGGAAATGGAAGTAAGCGATGGACAAAGAAATACTGAATCAAAGTCAAGGAAAGGGAATTTCATTTGGACGGATGCGTATGTTAAGATTTTTTGCAACATTTTATTGGAATTTCAGATGAAGTATGGTAAAAGTACGAAATATAAATGGTCTGCAATCCAACAAGATTTTGAACAAAGGACCAATAAAATATGTACTAATGTAAATTGTTGCAAGAACAAAATTGATACAATGAGGAAGGACTGGAACTCTTGGAAAGGATTAAAGAGAGGGGAAACTGGTCTAGGATGGGATCATGCAAGTGGTAGAATATCTGCTTCTAAGGAATGGTGGGACAAAAAAATCAAGGAAGATCCTAATTGCAGAAAGTTCCAAGATAAAGGAGTGTGTCATGAGATAGAAGATCTATGGGATAGATTATTTGCGGATACAGTCGCAACGGGGGTGAATTGTGTAACCCCGTCTATGGATCCTCCAAGTGTCAATAGGTCACAAGATGTGAATATGGAGAATGTGTATATACCCGTATATGATAACCCTAATATAGATGAAGATATTAGCAATAATGGTTATCCACAAAACATCCAATACTCTTCACATTTGGATGTGGAAGAGCTAGAGAGGCAAGAGAGTGGCTTTTTTAGCAACTTTGTGGAGGAATTGGAACGTGGAGGGAACCCCTCGGTTAATCAAAGTAGAGGTGTCACCCCTCATGCTCAAGGTGGAGGTGTTCCCCCTCTTGCTCAGAGTGGACTAAATAATTCGGAACATATTTTAGAGCAGGCTAAACAAACTCAAAAAACTCCCACATTGACTACAAAAGCCATGAAGCGTAGAAAAAGACAATCACCGGGAGCAGTATTGTTTCAAGAACATGTAACTAACATGAGTTCAAAATACGATCGTGCTTTGGAGATATTAGAGGCTGATTCAACAACTAGTGTGAATCAAACTCAAAGTGGGATTGCTTTAGCTCTTAGAGTTCTTGATCGTCTAGTTGACAAAGGTTCCATTGAAATGGGCAGTGATCTTTGGTGTTATGCAGCTACTTCACTCAAAGATGTTGATACACGAGAATTATTCATGAATTTGCGTGATGATGTTGCGAGGTTGGCTTGGATAAAATGGCAATTCAAGAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_428088.p1 GENE.S_Transcript_428088~~S_Transcript_428088.p1 ORF type:complete len:387 (+),score=65.58,Myb_DNA-bind_3|PF12776.3|9.1e-16,Myb_DNA-bind_3|PF12776.3|2e+02 S_Transcript_428088:379-1539(+)
MANDEREMEVSDGQRNTESKSRKGNFIWTDAYVKIFCNILLEFQMKYGKSTKYKWSAIQQDFEQRTNKICTNVNCCKNKIDTMRKDWNSWKGLKRGETGLGWDHASGRISASKEWWDKKIKEDPNCRKFQDKGVCHEIEDLWDRLFADTVATGVNCVTPSMDPPSVNRSQDVNMENVYIPVYDNPNIDEDISNNGYPQNIQYSSHLDVEELERQESGFFSNFVEELERGGNPSVNQSRGVTPHAQGGGVPPLAQSGLNNSEHILEQAKQTQKTPTLTTKAMKRRKRQSPGAVLFQEHVTNMSSKYDRALEILEADSTTSVNQTQSGIALALRVLDRLVDKGSIEMGSDLWCYAATSLKDVDTRELFMNLRDDVARLAWIKWQFKNK*

Click here to download the sequence:
Link to NCBI Protein BLAST