Transcript Information: S_Transcript_428199.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value1.4E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.283917232706
Replicate 220.764978407073
Replicate 317.202888279661
Condition 2: 8 Hour
Replicate 119.174930789355
Replicate 216.731886797779
Replicate 318.628976058135
Condition 3: 24 Hour
Replicate 115.787058657068
Replicate 220.949741793262
Replicate 322.042795110354


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_428199.p1 GENE.S_Transcript_428199~~S_Transcript_428199.p1 ORF type:5prime_partial len:119 (+),score=20.01,Sina|PF03145.12|5.9e-37 S_Transcript_428199:1-357(+)
CCTCATGAGGTTGAAAATGCCACTTGGATGCTTACGGTCTTTAGCTGCTATGGGCAGTACTTCTGCCTTCATTTTGAAGCATTCCAACTTGGTATGGCTCCTGTCTACATGGCTTTCTTACGGTTTATGGGAGATGATAACGAGGCAAAGAATTATAGCTACACCCTTGAGGTAGGAGGAAATGGAAGAAAGATGATGTGGCAAGGCGTTCCAAGAAGCATTAGGGACAGCCACCGCAAGGTGCGTGACAGTTTTGACGGGCTCATCATTCAGCGAAATATGGCTCTTTTCTTTTCGGGTGGTGACCGGAAGGAACTGAAACTGAGGGTGACAGGAAGAATCTTTAAAGAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_428199.p1 GENE.S_Transcript_428199~~S_Transcript_428199.p1 ORF type:5prime_partial len:119 (+),score=20.01,Sina|PF03145.12|5.9e-37 S_Transcript_428199:1-357(+)
PHEVENATWMLTVFSCYGQYFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKNYSYTLEVGGNGRKMMWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIFKEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST