Transcript Information: S_Transcript_42840.p1


Annotated TAIR IDAT1G27050.1
Annotated Gene Namehomeobox protein 54
Annotated Gene Symbol(s)ATHB54, HB54
Annotation TypeOrtholog
Chromosome Positionchr1:9393706-9394408 | Forward length=205
E-Value2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.573657112053
Replicate 216.662002530415
Replicate 318.058512415192
Condition 2: 8 Hour
Replicate 114.772275584264
Replicate 212.584164859846
Replicate 312.434244436239
Condition 3: 24 Hour
Replicate 116.611213487639
Replicate 214.755085661685
Replicate 311.166009241848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42840.p1 GENE.S_Transcript_42840~~S_Transcript_42840.p1 ORF type:complete len:192 (+),score=41.48,RRM_1|PF00076.18|2e-08 S_Transcript_42840:236-811(+)
ATGAGCCGCAAGAGAGAGAAACCCTACTTCTCCCGCCACGTCCCATACTCCTACCCAAAACGACGCCGCCCTCTTCCCCCTCCTACTCCTCCCATTGAAGATCCTCCTATCCCCAAACCAGCTCCTCCACCTGCTCTCCTCATTATTGGGCTTCCAACGGGCTGCTCTGTGTTGGACCTTAAAGCCCGCTTTGAAATCTATGGGCCCATCTCCCGGATCCGGATCGACCCAGATGGTGTTGGCTTCATCTCTTTCCGCTCCAAGTCTTCTGCCGATTCTGCCCTTGCTGCCTCCCTAGACCCCTCTTTCGGCATCTCCATTGACTCCCATAGAGTACAAGTAATGTGGTCGAGTGAAAAGAAGGATGAAGAAGGAGTAGCAGGAAATGAAGAAAAAGAGAGAAGATATTATTCATCCTCAAAGCTGTTGAAGGGAGAGACTCCATTAAGCAGACATGGAAGAGGAAATAGATTGAGTTCAGCCATTGTCAACCCCAATGCCAATGCTACAGATAGCTCTGTTTTGGATCCCCCTGTCAAGCCTAGGGAAATCATTGCCTATGATGATATTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42840.p1 GENE.S_Transcript_42840~~S_Transcript_42840.p1 ORF type:complete len:192 (+),score=41.48,RRM_1|PF00076.18|2e-08 S_Transcript_42840:236-811(+)
MSRKREKPYFSRHVPYSYPKRRRPLPPPTPPIEDPPIPKPAPPPALLIIGLPTGCSVLDLKARFEIYGPISRIRIDPDGVGFISFRSKSSADSALAASLDPSFGISIDSHRVQVMWSSEKKDEEGVAGNEEKERRYYSSSKLLKGETPLSRHGRGNRLSSAIVNPNANATDSSVLDPPVKPREIIAYDDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST