Transcript Information: S_Transcript_428542.p1


Annotated TAIR IDAT1G12090.1
Annotated Gene Nameextensin-like protein
Annotated Gene Symbol(s)ELP
Annotation TypeHomolog
Chromosome Positionchr1:4090176-4090589 | Reverse length=137
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3474937334269
Replicate 20.27927581718373
Replicate 30.23345235548862
Condition 2: 8 Hour
Replicate 10.40491247437594
Replicate 20.14159397873245
Replicate 30.26982085575926
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15963319243744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_428542.p1 GENE.S_Transcript_428542~~S_Transcript_428542.p1 ORF type:5prime_partial len:158 (+),score=28.84,Hydrophob_seed|PF14547.2|1.4e-24,Tryp_alpha_amyl|PF00234.18|1e-05 S_Transcript_428542:1-474(+)
GTCAATAATCCACTTGTAACACAGCTAGGGACAAGGGTCAAAGGGCAGAGGAGATCATCAATCATGAGTTCAGCCACAACAGCCTTTTGGCTCTCTCTTAACCTCTTATCATTTGTCTTGGTTACAAGCTGCTACACTTGTGGCAATAGGCCACAACCATATGTCCCAAACATCCCAAATTACAACCCATCACCATCTACAAATAATGTTGGTGGACATTGTCCAAGGGATGCCCTGAAACTTGGCGTATGTGCCAAGGTATTGAATGGGCCAGTAAATGCTGTGGTAGGGACCCCACCAACCCTTCCTTGTTGTAGTGTCATTGAAGGGCTTCTTGATTTAGAAGCTGCCATTTGCTTTTGTACTGCCATCAAGGCTAACATTCTTGGCATTAACCTCAACATTCCCATTGTTCTTAACTTGCTCATCAACACTTGTGGCAAGCAGCTCCCCTCTGAGTTCCTCTGTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_428542.p1 GENE.S_Transcript_428542~~S_Transcript_428542.p1 ORF type:5prime_partial len:158 (+),score=28.84,Hydrophob_seed|PF14547.2|1.4e-24,Tryp_alpha_amyl|PF00234.18|1e-05 S_Transcript_428542:1-474(+)
VNNPLVTQLGTRVKGQRRSSIMSSATTAFWLSLNLLSFVLVTSCYTCGNRPQPYVPNIPNYNPSPSTNNVGGHCPRDALKLGVCAKVLNGPVNAVVGTPPTLPCCSVIEGLLDLEAAICFCTAIKANILGINLNIPIVLNLLINTCGKQLPSEFLCG*

Click here to download the sequence:
Link to NCBI Protein BLAST