Transcript Information: S_Transcript_42878.p1


Annotated TAIR IDAT5G64230.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25692572-25693909 | Forward length=379
E-Value8.6E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6834435187414
Replicate 211.577503431171
Replicate 39.7235217470468
Condition 2: 8 Hour
Replicate 13.2199227954087
Replicate 22.8795448744203
Replicate 32.4798139540449
Condition 3: 24 Hour
Replicate 115.194089754596
Replicate 213.5197489849
Replicate 310.862959719035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42878.p1 GENE.S_Transcript_42878~~S_Transcript_42878.p1 ORF type:complete len:404 (+),score=88.36 S_Transcript_42878:241-1452(+)
ATGAACAAAGAGAAAAAAAGAATGGGGGTGATCATGGAGAACTCCTCAAAAGCAGCTCTTCTTCTCCTACACAATGTCATCAACCCATTAGTGTCGTCAGCAGACAAATCTCTCCTCTCCCTCTCCAAGAAATCTAAGCTCCTCCACCGCCTTCTCGCCTCGCTTTTCCTCCTTCTCCTCCACCTCTTCCACTCCCTCCCTTCTTCCTTCATACCCTTTTCTCTTGAAAACTATAACGGCAACAACAACAATGATGATAACGATAGTGATAGAAGCTTTCACCATAAGGCTATGATCATTAGGCACATCGGTAGTAGTAATAGGAACGATAATAATGCGAGTGCTAGATATGGTGGCTTGGCTATAGCCAGGGCTCTTCACCAGCTGCTCGAGCTCATGAGCAACATCCCGGTTAGCTCTAGGAAGTACGATGTCGTTAGATGCCTGGCTGAGAAGCTCATCAATGAGAACCTCCAAGAAGGGTCGGAGGTGTTAAGGGAAGTCAACTGTGTTGTTCTTTCTCAGGCTTTTGGTAAGACTTTGACCCAGCTTGAAGCCGCCTTGTCTGACCAAGACTGTGGTGGGCTTGGTTGTGCTGAAAGTGGGCTGGGCCGGGCTGTGAGGGCGGCTACTGGATGGTACTGGAAATCTAGGGCGAGAGGTGGTGGTGCTGAGCATAACTGGGCTACTAGTGAGCTGTCAGTTGAGAAGATGGTGGCGGAGCTGCTGTGGCTGGCCCAAAAAATGGAGGCCAGTTGGGGAGTAGAGGTGGCTGTGGAGAAATGGGCTTGGGCTTTGAATTTGGGCTGGCTAGCTTTGTCGGCTGAAGCCCGCACCCAATCCTCCCTTGTCAAGCTCACAGCTTTCTTGATCAAGCAAGTGAAGGGCATGGGTAAAGAGCAAGACACTGGTGGAGGGGAAACCGAGCAGCAAAAGCAAACAAAGATGAAGATGTTGATGACATGGGTTCCATTACTGTGCCGAGCCAGCAGTGGAAATGATGCACCGACTCTTAGCACCAGTGAGAGAGGAGATATTGAGAGGGCATTGGAGGAGATAATTGACAAGCTTGAGGAAGAGGCAGACCAAGAAAAAGTTCTATCTTTGTGGCTACACCACTTTACACAATGCCCTTCTTCAGATTGGCCTAATCTCTACAACTCGTACACCCGGTGGTGTACTGTCTCTTGCAAGCTTCTCTTAACACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42878.p1 GENE.S_Transcript_42878~~S_Transcript_42878.p1 ORF type:complete len:404 (+),score=88.36 S_Transcript_42878:241-1452(+)
MNKEKKRMGVIMENSSKAALLLLHNVINPLVSSADKSLLSLSKKSKLLHRLLASLFLLLLHLFHSLPSSFIPFSLENYNGNNNNDDNDSDRSFHHKAMIIRHIGSSNRNDNNASARYGGLAIARALHQLLELMSNIPVSSRKYDVVRCLAEKLINENLQEGSEVLREVNCVVLSQAFGKTLTQLEAALSDQDCGGLGCAESGLGRAVRAATGWYWKSRARGGGAEHNWATSELSVEKMVAELLWLAQKMEASWGVEVAVEKWAWALNLGWLALSAEARTQSSLVKLTAFLIKQVKGMGKEQDTGGGETEQQKQTKMKMLMTWVPLLCRASSGNDAPTLSTSERGDIERALEEIIDKLEEEADQEKVLSLWLHHFTQCPSSDWPNLYNSYTRWCTVSCKLLLTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST