Transcript Information: S_Transcript_42887.p1


Annotated TAIR IDAT4G13590.1
Annotated Gene NameUncharacterized protein family (UPF0016)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7901369-7903792 | Reverse length=359
E-Value2.3E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.987741164251
Replicate 232.640839345364
Replicate 339.613986546693
Condition 2: 8 Hour
Replicate 132.017298339148
Replicate 233.711004799588
Replicate 341.288504812937
Condition 3: 24 Hour
Replicate 135.251058564274
Replicate 244.458326270314
Replicate 344.777766505521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42887.p1 GENE.S_Transcript_42887~~S_Transcript_42887.p1 ORF type:complete len:365 (+),score=79.32,UPF0016|PF01169.15|5e-20,UPF0016|PF01169.15|4.1e-22 S_Transcript_42887:254-1348(+)
ATGACGGGAGGAGGCCAACAGCCACTTATTGCTTCAACTACACTAAGACCATCATCATCATTATCATCAATTTCAAGTTTCAGGCCTAAATTACTTCCTTACTTTGCTCGTTCACCTTCTCCCACTTTGCCCAGATGCTCTTTCTCTCCTTCATTGGCACAAAGGGAAACACGAAGGTTGAAGTTGGTCTTCAGGCCTATCAGATCTCAGGCATCAAATGTTGGTGTTGGATCAAGCAGCTTTGATGGAGGGGAGGAGAGTAACAGTCAGAATACATTCATTAATAGCCCGTCCGATGAAAGTTCCTCTCAAGTAGAGAAGCGTCCTAATCCAGTTCCTTATCCTCTCTCTATAGCCCTGGTGCTATGTGGGTGTGCTGTAATATATTCGCTGATTATGTTTGTGAAAGGAGGCCCTCAATCCATTTTGGCAGCCATTGCAAAGTCTGGATTTACTGCTGCGTTCACATTGATATTTGTCTCAGAAATTGGGGACAAGACTTTCTTCATTGCCGCACTCCTTGCCATGCAATATGAAAAAGGGCTGGTCTTGTTGGGATCAATGGCTGCCCTTGCACTGATGACTATCTTATCAGTCATCATTGGACGGATATTTCAGTCAGTACCAGCTCAATTTCAGACAACTCTGCCCATTGGAGAATATGCTGCTGTGACTCTTCTTTTGTTCTTTGGTTTCAAAGCAATAAAGGATGCATGGGAGCTCCCCCCCAATGAAGTCAAGGCTGCAAAGAAGGATGGTCCTGAACTTGATGAATATGCTGAAGCCGAGGAGCTAGTGAAGGAGAAGGTGTCAAAACGAATGTCAAATCCTCTAGAAATTCTCTGGAAGTCGTTCAGCCTTGTATTCTTCGCGGAATGGGGAGATCGCTCAATGCTTGCGACTGTGGCACTTGCTGCTGCACAGTCACCATGGGGTGTGGCAAGTGGAGCCATTCTAGGACACCTTATCGCTACATGCATTGCAGTTCTAGGAGGAGCATTCCTTGCCAACTACATTTCTGAAAAGCTGGTCGGCTACTTGGGAGGCGTACTCTTTCTTCTTTTTGCTGTAGCAACATTCTTTGGTTTTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42887.p1 GENE.S_Transcript_42887~~S_Transcript_42887.p1 ORF type:complete len:365 (+),score=79.32,UPF0016|PF01169.15|5e-20,UPF0016|PF01169.15|4.1e-22 S_Transcript_42887:254-1348(+)
MTGGGQQPLIASTTLRPSSSLSSISSFRPKLLPYFARSPSPTLPRCSFSPSLAQRETRRLKLVFRPIRSQASNVGVGSSSFDGGEESNSQNTFINSPSDESSSQVEKRPNPVPYPLSIALVLCGCAVIYSLIMFVKGGPQSILAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMAALALMTILSVIIGRIFQSVPAQFQTTLPIGEYAAVTLLLFFGFKAIKDAWELPPNEVKAAKKDGPELDEYAEAEELVKEKVSKRMSNPLEILWKSFSLVFFAEWGDRSMLATVALAAAQSPWGVASGAILGHLIATCIAVLGGAFLANYISEKLVGYLGGVLFLLFAVATFFGFF*

Click here to download the sequence:
Link to NCBI Protein BLAST