Transcript Information: S_Transcript_428887.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value7E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30945350273466
Replicate 20
Replicate 30.21445041957675
Condition 2: 8 Hour
Replicate 10.74390896455115
Replicate 20.26013777488054
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.52706538549645
Replicate 30.293279586106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_428887.p1 GENE.S_Transcript_428887~~S_Transcript_428887.p1 ORF type:5prime_partial len:86 (+),score=6.52,zf-RVT|PF13966.2|7.6e-10 S_Transcript_428887:2-259(+)
TTAGGGAGACTTAATACCAACGATATGTTGCAGAGACGAAGTCCAGGATGTTGTCTCTCACCTGATGTGTGCGTTTTGTGTGGTCAAAGTGGAGAATCGGCGGCTCATTTATTTTTGCACTGTAAGCTAGCGCAGAGGTTATGGCGACGGCTCTTTGGGGTGAAGACGGAGGTTGTGGTGTTTCCCGCCAATATCCTTGAGTTCCTACAGGTTCAGTGTGTGGGTTTTGGGAGTGATAAGGAGTTGAAGCTCCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_428887.p1 GENE.S_Transcript_428887~~S_Transcript_428887.p1 ORF type:5prime_partial len:86 (+),score=6.52,zf-RVT|PF13966.2|7.6e-10 S_Transcript_428887:2-259(+)
LGRLNTNDMLQRRSPGCCLSPDVCVLCGQSGESAAHLFLHCKLAQRLWRRLFGVKTEVVVFPANILEFLQVQCVGFGSDKELKLL*

Click here to download the sequence:
Link to NCBI Protein BLAST