Transcript Information: S_Transcript_4289.p1


Annotated TAIR IDAT5G15410.1
Annotated Gene NameCyclic nucleotide-regulated ion channel family protein
Annotated Gene Symbol(s)DND1, ATCNGC2, CNGC2
Annotation TypeOrtholog
Chromosome Positionchr5:5003460-5006763 | Reverse length=726
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.970298628167
Replicate 215.708922466809
Replicate 316.657226095115
Condition 2: 8 Hour
Replicate 112.831821869746
Replicate 215.024231684522
Replicate 315.908518616953
Condition 3: 24 Hour
Replicate 125.351843952932
Replicate 223.274845711984
Replicate 326.92205965301


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4289.p1 GENE.S_Transcript_4289~~S_Transcript_4289.p1 ORF type:5prime_partial len:816 (+),score=62.47,Ion_trans|PF00520.27|2.1e+03,Ion_trans|PF00520.27|2e-10,cNMP_binding|PF00027.25|5.3e-06 S_Transcript_4289:2-2449(+)
AAATCCACAACAGAACAGGTCCCCCTAGTAAAGTTCCGTAAACAGGATCCTTCCTTCTTCAATTTCATTTTCATGTGCTCACTCAACTTAATCTCTCACTACTCGACAGACCAAGAAGCTGTTCTCATCCCTTCAATTCCCCTTCATCTTCACTACACAACTTACCCATCTATCCCTTCTAATCAAACAAAGTGTCCCTTAATTTTTTTTCTCCTCTTCAACAATTTTTTCCATGGTTGCCCCTTCCCTACCACCATGCCCTCTCTTCATTTCCCCAATTTTTTTCTCATCAGGTTTGTGCAGAAGCTGCTCAAATGCGGAAGTGACGAGAAAACGAACGGGGCTGTAGACGTGAGTAGCAGCCACGGGCTAAGTGGCGGCAGTACTGGTGGTGTTGGCGGCAACAACAGTAATATCGAGGAATATGAGAGTAGCAGTACCCCAATTGAGTGTTACGCCTGCACCCAAGTCGGTGTGCCGGTGTTCCACTCAACCAGCTGCGATCGGGCTAACCAGCCCGAGTGGGAGGCCTGTGCCGGATCCTCCCTCTATCCAACCAATGCCCGCCCTTCCACCTCTCGGGCTAGAGGGAGGAGTCGACACAGTAGTAGCAGTAGAAGGCAGTCAAACCTTTTCGGACCCATCCTCGACCCAAGGAGTGACAGGGTCCGGAGCTGGAACCGGATCACACTGCTTGCCAGGGCAATCGCCCTGGCACTTGATCCAGTTTTCTTTTACGGTTTGTCTCTCGGCAGGAGCGGGTCGTGTCTTTACTTGGACGGGGTGTTGGTTGCCGTCGTCACGGTCCTTCGCACGTGTGTGGATGCGGTTCACCTCTGGCACGTGTGGCTCCAGTTCCGGCTTGCTTACGTGTCAAGGGAATCGTTGGTTGTTGGCTGTGGGAAGCTCGTGTGGGATGCACGTGCAATTGCTTCTCACTATGTTCGCTCCTTGAAGGGCTTCTTGTTCGATCTTTACGTTATACTGCCTATCCCTCAGGTCATATTCTGGTCTGTGGTACCACAATTACTAAGAGAAGACCAAATAGGAATCCTGATGACAATAATCCTTCTTATCTTTCTGGTCCAATTCTTGCCCAAAGTTTACCACAGTATATATGTAATGAGAAAAATGCAAAAGGTTACTGGGTATATATTTGGTACCATATGGTGGGGGTTTGGATTGAATCTCATTGCTTACTTTATAGCTTCTCATGTTGTTGGAGGATGTTGGTACGTTCTTGCAATACAACGGGTTGCAGCTTGCCTTGCACAGCAGTGCAATCGAAACAGCAAGTGTCATCTATCATTGTCTTGCTCAAAAGAAGTTTGCTACCAGTTTTTACAACAAGAAGACGGACTTGGGACTTGTGATAATAACTCCACAATGTTCCCAAAGTCGTTTTGCTTAGATGACAATGGGCCTTTCAGCTATGGAATTTATAGTCAAGTTCTTCCTGTCCTGTCCAGCAATGCCATCGTTATTAAGATCCTTTATCCTATATCATGGGGTTTGTTCCAGCTTAGCACCTTCGGAAATAATCTGACTCCCACAAGCCAATGGGCAGAAGTGGTATTTTGCATGAGCCTTGTACTTGGTGGTTTAATGCTCTTTACCTTGTTGATAGGCAACATTCAGGTATTTCTGCATAATGTGATGGCGAAAAAGAGAAAGATGCAGCTTAGATGCCGAGACATGGAATGGTGGATGAGACGGAGACAATTACCATCTCGGCTTAGGCAAAGAGTCCGTCACTTTGAACGCCAGAATTGGGTCACTACAGGTGGAGTTGATGAGATGGAGTTGATCAAAGACTTGCCAGAAGGGCTTCGCCGAGACATTAAGCGCCATCTTTGCCTTCAGCTCATCAAGAAGGTTCCCCTGTTCCATTGCTTGGACGATCTCATCCTTGACAACATTTGCGACAGAGTTAGACCACTCATCTACTGCAAGGACGAGAAGATCATGAGGGAAGGAGATCCTGTGCAACGGATGGTGTTCATTGTTCAAGGGCGAATAAAAAGCAACCAAAACTTAAGCAAAGGAATGGTAGCTACAGATGTTCTTGAACCAGGATCCTTTCTAGGAGACGTGCTCTTGTCTTGGTGCCTTCGAAGACCGTTCATTCACCGGCTCCCAGCCTCATCCGCAACATTCACTTGTCTAGAATCAACTGAGGCTTTTGGTCTAGATGCATATGACCTTCGTTACATTACTGAACATTTTCGTTATAAATTTGCAAATGATCATCTTAGGCGGACTTTGAGGTACCATTCCTCTAACTGGAGGACGTGGGCAGCAGTTAATATACAGTTTGCTTGGCGGCGTTACATGAAGAGAACCAGAGGTTCAGTGCCTCATGTGACCCAGAATGGTGATGCTGACAAAAGGCTCCTCCAGTTTGCTGCTTTGTTCATGTCCATCAGACCACTTGATCATCTTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4289.p1 GENE.S_Transcript_4289~~S_Transcript_4289.p1 ORF type:5prime_partial len:816 (+),score=62.47,Ion_trans|PF00520.27|2.1e+03,Ion_trans|PF00520.27|2e-10,cNMP_binding|PF00027.25|5.3e-06 S_Transcript_4289:2-2449(+)
KSTTEQVPLVKFRKQDPSFFNFIFMCSLNLISHYSTDQEAVLIPSIPLHLHYTTYPSIPSNQTKCPLIFFLLFNNFFHGCPFPTTMPSLHFPNFFLIRFVQKLLKCGSDEKTNGAVDVSSSHGLSGGSTGGVGGNNSNIEEYESSSTPIECYACTQVGVPVFHSTSCDRANQPEWEACAGSSLYPTNARPSTSRARGRSRHSSSSRRQSNLFGPILDPRSDRVRSWNRITLLARAIALALDPVFFYGLSLGRSGSCLYLDGVLVAVVTVLRTCVDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFLFDLYVILPIPQVIFWSVVPQLLREDQIGILMTIILLIFLVQFLPKVYHSIYVMRKMQKVTGYIFGTIWWGFGLNLIAYFIASHVVGGCWYVLAIQRVAACLAQQCNRNSKCHLSLSCSKEVCYQFLQQEDGLGTCDNNSTMFPKSFCLDDNGPFSYGIYSQVLPVLSSNAIVIKILYPISWGLFQLSTFGNNLTPTSQWAEVVFCMSLVLGGLMLFTLLIGNIQVFLHNVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQNWVTTGGVDEMELIKDLPEGLRRDIKRHLCLQLIKKVPLFHCLDDLILDNICDRVRPLIYCKDEKIMREGDPVQRMVFIVQGRIKSNQNLSKGMVATDVLEPGSFLGDVLLSWCLRRPFIHRLPASSATFTCLESTEAFGLDAYDLRYITEHFRYKFANDHLRRTLRYHSSNWRTWAAVNIQFAWRRYMKRTRGSVPHVTQNGDADKRLLQFAALFMSIRPLDHLD*

Click here to download the sequence:
Link to NCBI Protein BLAST