Transcript Information: S_Transcript_428924.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value4E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13440909714738
Replicate 20.11142823008846
Replicate 30
Condition 2: 8 Hour
Replicate 10.32311197450202
Replicate 20.22597826908815
Replicate 30.32296738795426
Condition 3: 24 Hour
Replicate 10.88262155517552
Replicate 20.34339108449011
Replicate 30.1273840626521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_428924.p1 GENE.S_Transcript_428924~~S_Transcript_428924.p1 ORF type:internal len:198 (+),score=34.34,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|2.5e-20,PPR_2|PF13041.2|8.2e-16,PPR_2|PF13041.2|2.7e-11,PPR_2|PF13041.2|9.4e-17,PPR_2|PF13041.2|1.5e-05,PPR_1|PF12854.3|15,PPR_1|PF12854.3|2.6e-15,PPR_1|PF12854.3|3.3e-12,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|2.5e-07,PPR|PF01535.16|3.5,PPR|PF01535.16|6.4e-09,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.017,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.00011,PPR_3|PF13812.2|12,PPR_3|PF13812.2|4e-07,PPR_3|PF13812.2|7.9e-06,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.00086,PPR_3|PF13812.2|0.019,MRP-S27|PF10037.5|2.2,MRP-S27|PF10037.5|7.7,MRP-S27|PF10037.5|0.0037 S_Transcript_428924:3-593(+)
AAAAACATTGATGCAGCTCTCAGCCTATTCCAAGAAATGTCTCTTGAGGGCCTCTCACCTAATGTTTGTACCTACAATACTCTCATTGATGGCTTGTGCAAGAGCAAAAGACTTGAATCAGCTTTCCGACTGTTCGAGGAAATAAAAGCTTATGGACTACATCCAAATATTGTCACATATGCTTCGTTGGTTGACGGTTTGTGTAAAGATGCACGAATTGAAGAGGCTACGGAACTGCTTAGGGACATGAAGAACAATGGAGTGGTTCCTAATAAATTCATCTATGCCATTTTTCTTAATGCTCTGTGCGAAGCTGGTAGACTTACAGAAGCAGAGGACATTTTTTCTTTCCTTTTAACCAAGGGGTCAAAACCAGATGTGCACATCTATACTATAATGATCAAAGGACTTTGCAAACAAAGGAAGCTGGGTGTTGCCATTGAACTTTTATCAAAAATGGAAGAAAAGGGATGTGCTCCCAATGATTGCACTTACAACACAATTATTAGAGGATTTGTTCATGGGAATGATCTCAAAAAAGCTTTGGAGCTTGTCACCATTATGACTGGCAAAGGTTTCGCAGCTGATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_428924.p1 GENE.S_Transcript_428924~~S_Transcript_428924.p1 ORF type:internal len:198 (+),score=34.34,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|2.5e-20,PPR_2|PF13041.2|8.2e-16,PPR_2|PF13041.2|2.7e-11,PPR_2|PF13041.2|9.4e-17,PPR_2|PF13041.2|1.5e-05,PPR_1|PF12854.3|15,PPR_1|PF12854.3|2.6e-15,PPR_1|PF12854.3|3.3e-12,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|2.5e-07,PPR|PF01535.16|3.5,PPR|PF01535.16|6.4e-09,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.017,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.00011,PPR_3|PF13812.2|12,PPR_3|PF13812.2|4e-07,PPR_3|PF13812.2|7.9e-06,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.00086,PPR_3|PF13812.2|0.019,MRP-S27|PF10037.5|2.2,MRP-S27|PF10037.5|7.7,MRP-S27|PF10037.5|0.0037 S_Transcript_428924:3-593(+)
KNIDAALSLFQEMSLEGLSPNVCTYNTLIDGLCKSKRLESAFRLFEEIKAYGLHPNIVTYASLVDGLCKDARIEEATELLRDMKNNGVVPNKFIYAIFLNALCEAGRLTEAEDIFSFLLTKGSKPDVHIYTIMIKGLCKQRKLGVAIELLSKMEEKGCAPNDCTYNTIIRGFVHGNDLKKALELVTIMTGKGFAADA

Click here to download the sequence:
Link to NCBI Protein BLAST