Transcript Information: S_Transcript_428949.p1


Annotated TAIR IDAT1G06710.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2056999-2060242 | Reverse length=997
E-Value5.8E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94372344805605
Replicate 21.1996315835055
Replicate 31.6131944092038
Condition 2: 8 Hour
Replicate 12.1174146414175
Replicate 21.8510985872114
Replicate 31.1590177184742
Condition 3: 24 Hour
Replicate 11.8074962699073
Replicate 21.3930475200592
Replicate 31.1925316503601


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_428949.p1 GENE.S_Transcript_428949~~S_Transcript_428949.p1 ORF type:internal len:423 (-),score=68.93,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|6,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|4.2e-10,PPR_2|PF13041.2|19,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|2.9e-14,PPR_2|PF13041.2|3.7e-18,PPR_2|PF13041.2|3.1e-20,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|4.2e-08,PPR_1|PF12854.3|50,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|5.4e-05,PPR_1|PF12854.3|3.2e-12,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|7.8e-08,PPR|PF01535.16|0.54,PPR|PF01535.16|0.0052,PPR|PF01535.16|0.22,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|0.93,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|30,PPR|PF01535.16|40,PPR|PF01535.16|0.015,PPR|PF01535.16|0.0037,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|1.6e-07,PPR|PF01535.16|0.038,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.93,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.4e-05,PPR_3|PF13812.2|8e-06,PPR_3|PF13812.2|8.1,ANAPC3|PF12895.3|3.5e+03,ANAPC3|PF12895.3|0.14,ANAPC3|PF12895.3|1.4e+02,ANAPC3|PF12895.3|2.7,ANAPC3|PF12895.3|1.4e+02,AEP1|PF17049.1|7e+02,AEP1|PF17049.1|1,AEP1|PF17049.1|6.9e+02,AEP1|PF17049.1|0.11 S_Transcript_428949:2-1267(-)
AAAAATGATAGGGTACCTGAACAATTTTTTAGGGATATTGGGGATGATGATAGAGAAGTATTAGGGAAGTTGCTTAATGTATTGGTCCGGAAATGCTGCCGGAATGGGAGGTGGAATTTGGCATTGGAGGAGCTTGGAAGGCTTAAGGAATTCGGGTACAGACCATCCAAGGCCACATATGATGCTCTCATTCGAGTGTACTTGGAGGCAGATAGGTTGGACACAGCTCGTTTGCTTTATAGGGAGATGTCTAGTGCTGGGTTTAGAATGCATATCTCTAATTTGAGTAGTTTTTCATATGCCCTTTGTAAGGATGGACGTTGGAGGGAAGCCCTTGAATTGATAGAGAAGGAAGAGTTTGTCTTGGATACTAAACTTTATACAACAATGATATCTGGTTTATGCAAGGCTTCACTTTTTGATGAAGCCATGGATTTCTTGAACAAAATGAGATGTAGTTCTTCATTGCCTAATGTTGTGACATACAGGGTTTTTCTTTGTGGATGTCTGAACAAAAGACAGCTTGGCAGGTGTAAGAGGATACTAGGCATGATGATGGAGGAAGGTTGTTACCCTAGTCGTAAAATATTTAATTCACTTGTCCATGGATATTGTAGATCAGGGGATTTTAGTTATGCTTATCAATTGCTTAAGAAAATGGCAGATTGTGGATGCGAACCTGGTTATCTGGTTTATAATATATTAATAGGTGGAATCTGTAGTAAGGAGTTACCCAGTTCAGCTGAATTAGAATTGGCGGAGAAAGTCTACAGTGAAATGCTTAACCTGGGATTGGTATTAAACAAGGTCAATGTCGGAAACTTCTCTAGATGCCTTTGTGAGGCTGGAAAGTTTGACAAGGCATATACTATTATTCATGAAATGATGAATGAGGGTTTCATACCCGACTGCTCTACGTACTCCAAGGTAATCGAATTCCTGTGCAATGGGTCGCAGATGCAGAAGGCTTTTCTGCTATTTGAAGAGATGAAGAGAAGTAGTGTTGCTCCAGACGTATATGTGTATACTATTCTGATTGATGGTTTCTGTAAGGCTGGTCTTGTTGCTCAAGCACGTAAGTGGTTTGATGAAATGGTCAGGAATAACTGTTCTCCTAATGTGGTGACTTACACTGCATTAATTCATGCATACCTTAAAGTGCACAGGATAGATGATGCAAAGAAGCTTTTTGAGATGATGTTGTCGAATGGCTGCATACCCAATGTCGTGACATATACTGCTCTGATCGATGGTTACTGCAAATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_428949.p1 GENE.S_Transcript_428949~~S_Transcript_428949.p1 ORF type:internal len:423 (-),score=68.93,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|6,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|4.2e-10,PPR_2|PF13041.2|19,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|2.9e-14,PPR_2|PF13041.2|3.7e-18,PPR_2|PF13041.2|3.1e-20,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|4.2e-08,PPR_1|PF12854.3|50,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|5.4e-05,PPR_1|PF12854.3|3.2e-12,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|7.8e-08,PPR|PF01535.16|0.54,PPR|PF01535.16|0.0052,PPR|PF01535.16|0.22,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|0.93,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|30,PPR|PF01535.16|40,PPR|PF01535.16|0.015,PPR|PF01535.16|0.0037,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|1.6e-07,PPR|PF01535.16|0.038,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.93,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.4e-05,PPR_3|PF13812.2|8e-06,PPR_3|PF13812.2|8.1,ANAPC3|PF12895.3|3.5e+03,ANAPC3|PF12895.3|0.14,ANAPC3|PF12895.3|1.4e+02,ANAPC3|PF12895.3|2.7,ANAPC3|PF12895.3|1.4e+02,AEP1|PF17049.1|7e+02,AEP1|PF17049.1|1,AEP1|PF17049.1|6.9e+02,AEP1|PF17049.1|0.11 S_Transcript_428949:2-1267(-)
KNDRVPEQFFRDIGDDDREVLGKLLNVLVRKCCRNGRWNLALEELGRLKEFGYRPSKATYDALIRVYLEADRLDTARLLYREMSSAGFRMHISNLSSFSYALCKDGRWREALELIEKEEFVLDTKLYTTMISGLCKASLFDEAMDFLNKMRCSSSLPNVVTYRVFLCGCLNKRQLGRCKRILGMMMEEGCYPSRKIFNSLVHGYCRSGDFSYAYQLLKKMADCGCEPGYLVYNILIGGICSKELPSSAELELAEKVYSEMLNLGLVLNKVNVGNFSRCLCEAGKFDKAYTIIHEMMNEGFIPDCSTYSKVIEFLCNGSQMQKAFLLFEEMKRSSVAPDVYVYTILIDGFCKAGLVAQARKWFDEMVRNNCSPNVVTYTALIHAYLKVHRIDDAKKLFEMMLSNGCIPNVVTYTALIDGYCKS

Click here to download the sequence:
Link to NCBI Protein BLAST