Transcript Information: S_Transcript_42911.p1


Annotated TAIR IDAT1G10890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3628081-3630545 | Forward length=288
E-Value4.2E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.345835556346
Replicate 225.642789372508
Replicate 327.698901740653
Condition 2: 8 Hour
Replicate 136.132453782614
Replicate 247.529625600627
Replicate 346.331804605544
Condition 3: 24 Hour
Replicate 130.088235751196
Replicate 233.012193465925
Replicate 331.884471229109


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42911.p1 GENE.S_Transcript_42911~~S_Transcript_42911.p1 ORF type:complete len:265 (+),score=64.79,ARGLU|PF15346.2|1.6e+04,ARGLU|PF15346.2|4.4e-41 S_Transcript_42911:1887-2681(+)
ATGCTGCTGGCTTTACTATGTTCATCCATTGTGTTAGCGACTACTGTGATTAAAGATGGAGCACCAAAGCTTTTTGTTTACAATTTAATGAGAAGAAAAAGTCGTTCTATATCCCCACGCCGTCGCAAAAATCGTTCTCGAACTCCTAGACGACATAGGAGCCGTTCGTCTTCGCCTAGGCGCTATAGGCGACGACGGAGTGTCAGTACTTCGCCGTCTCCTGTGCGTAGATTGTGTAGTCCAAGCCTTGACTCAACTGAGCAAAAAAACTCCAGTGAGAAACTAAAACAAGAAGAAGAGAAGCAAAGGCGTCAGCAGGAGGCAGAATTGAAACTAATTGAGGAGGAAACTGCTAAAAGAGTGGAGGAAGTGATTCAGAGAAAAGTTGCTGACAGCTTGGACTGTGAGGAGATAAAGCTAGAAGTACAGAAACGCTTAGAGCAAGGCCGAAAGAAGTTACATGAAGAAGTCGCAGCTGAACTGGAGAAAGAAAAGCAAGCTGCTTTGATTGAGGCTCGATGGAAAGAGGAACAGGCTCGAAAGGAGAAGGAAGAGCTGGAAAAGATGCTGGAAAAAAACCGACGAAGGCTTGAGGAGGCTCAGAGACAGGAAGCACTAGAGCAGCAGAAGAGAGAAGAGGAACGTTATCGGCAACTGGAAGAGATGCAAAGACAGAAGGAAGAGGCTATGCGGAGGAAGAAACAGCAAGAAGAGGAAGAACGGGCAAAACAGATGATGTTACTTGGCAAGAACAAGTCTAGGCCGAAATTGTCGTTTGCGCTTAATTCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42911.p1 GENE.S_Transcript_42911~~S_Transcript_42911.p1 ORF type:complete len:265 (+),score=64.79,ARGLU|PF15346.2|1.6e+04,ARGLU|PF15346.2|4.4e-41 S_Transcript_42911:1887-2681(+)
MLLALLCSSIVLATTVIKDGAPKLFVYNLMRRKSRSISPRRRKNRSRTPRRHRSRSSSPRRYRRRRSVSTSPSPVRRLCSPSLDSTEQKNSSEKLKQEEEKQRRQQEAELKLIEEETAKRVEEVIQRKVADSLDCEEIKLEVQKRLEQGRKKLHEEVAAELEKEKQAALIEARWKEEQARKEKEELEKMLEKNRRRLEEAQRQEALEQQKREEERYRQLEEMQRQKEEAMRRKKQQEEEERAKQMMLLGKNKSRPKLSFALNSK*

Click here to download the sequence:
Link to NCBI Protein BLAST