Transcript Information: S_Transcript_42941.p1


Annotated TAIR IDAT1G53250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19857468-19859156 | Forward length=371
E-Value5.5E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.707708089799
Replicate 212.024220308846
Replicate 312.956022098729
Condition 2: 8 Hour
Replicate 119.406105188591
Replicate 219.966874910956
Replicate 319.717159034608
Condition 3: 24 Hour
Replicate 113.598439972895
Replicate 217.337815855906
Replicate 311.728250648379


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42941.p1 GENE.S_Transcript_42941~~S_Transcript_42941.p1 ORF type:complete len:400 (+),score=101.65,NUMOD3|PF07460.7|1.1e-05,NUMOD3|PF07460.7|18,NUMOD3|PF07460.7|5.7,NUMOD3|PF07460.7|4.5e+03 S_Transcript_42941:216-1415(+)
ATGTCATTGCCCCATTTGGCATTTTTTGTTCAACCCCGGTTTACTCATCGGGATTCCTGTGTTCGACTGTGGCCACTTTGTACTATGATTGACCATTCAGATCAAGAACATCGAGAATTAGCTGTGAGATTCTATTGTTGCAACACCCCGATGAAGTATTTACCTAGACCATCTGGTAGCCCTAGCTCCAGCATCAGGGTGCATCCTGTAGAAGCAGTTACTCTTGCTACAAAGGAAAGGGAGTCCCTTGATATGAGTTCTGAGCCAATTTCTAGACTAAATTTGTGTTATGATGATGCATCAATTGCTGTTGATGGACTAGCATGCCAGCATTCTGAGCCTGTGTTGATGCAGAGCATGGAGGAAGACAAGGAAACTCTAAGGAGGAGGAGAATAGGTTTGGCAAACAAGGGAAAAGTGCCTTGGAACAAAGGCAAGAAGCATAGCGCAGAGACTCGTGCGCGGATCAAGGAGAGAACCCTACAAGCCTTGAGAGATCCCAAGGTCAGAAAGAAGATGTCAGAATCTCCTCGCTTCCACAGTGAGCAATCCAAGGGAAAAATCAGTTCTTCACTCAGACAACTATGGGCAGAACATTTGAAATGGAAACGCTCAAAAGAAAAATTTTATTCCTCATGGGCTGAAAGCATCGCAGAGGCTGCGAGGAAAGGAGGGATCGATGAAGAAGAACTCAGTTGGGATAGTTATGAGAAAATTAAAGAAGAGATGGCATGCCAACAACTTCAAAGGGCTGCAGAAAAGGCCAAGGAGAAAGAAATGAAAAAGATTCAAGCAGAGAAAAGAATACAGAAAAGAGCAGAGAAGATGAGATGGCTTGCACAGAGAAAATTGGAGCATAAACAGAAGGCCAAACCAAATGCGAAACAGAAAAGGAAGATGAGTTGCAAAACAAGGGAGGAAGAGAAAGAGCTAGCTCCTTCAAGGGACTTAAACCTTGAGGTTAGAACCACAAAGATTCATGGGAAGAAGTTAAAAGATGGACCATCCTGCAGTAATGCTGGTGTTATGAATTATCTTCAATCAGCATTGGAGAGCTTTGATATTGAATATATCAGGAAAGAACTAACGAGAAGCACAGTTTCACTGGCTGATCAAATTCAAGCTGCTAAGAGCAAAAGAAAACAAACTGTAGCTTGCGATATGCAGCAACATCATCCAGTCTTGAATGTTAAATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42941.p1 GENE.S_Transcript_42941~~S_Transcript_42941.p1 ORF type:complete len:400 (+),score=101.65,NUMOD3|PF07460.7|1.1e-05,NUMOD3|PF07460.7|18,NUMOD3|PF07460.7|5.7,NUMOD3|PF07460.7|4.5e+03 S_Transcript_42941:216-1415(+)
MSLPHLAFFVQPRFTHRDSCVRLWPLCTMIDHSDQEHRELAVRFYCCNTPMKYLPRPSGSPSSSIRVHPVEAVTLATKERESLDMSSEPISRLNLCYDDASIAVDGLACQHSEPVLMQSMEEDKETLRRRRIGLANKGKVPWNKGKKHSAETRARIKERTLQALRDPKVRKKMSESPRFHSEQSKGKISSSLRQLWAEHLKWKRSKEKFYSSWAESIAEAARKGGIDEEELSWDSYEKIKEEMACQQLQRAAEKAKEKEMKKIQAEKRIQKRAEKMRWLAQRKLEHKQKAKPNAKQKRKMSCKTREEEKELAPSRDLNLEVRTTKIHGKKLKDGPSCSNAGVMNYLQSALESFDIEYIRKELTRSTVSLADQIQAAKSKRKQTVACDMQQHHPVLNVKF*

Click here to download the sequence:
Link to NCBI Protein BLAST