Transcript Information: S_Transcript_42943.p2


Annotated TAIR IDAT1G53250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19857468-19859156 | Forward length=371
E-Value5.8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62252634468258
Replicate 20.9031551280854
Replicate 31.5099316091837
Condition 2: 8 Hour
Replicate 12.6189075828058
Replicate 22.3549314357607
Replicate 31.9944652729807
Condition 3: 24 Hour
Replicate 11.2774785667014
Replicate 21.7229798274416
Replicate 30.8849840142146


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42943.p2 GENE.S_Transcript_42943~~S_Transcript_42943.p2 ORF type:complete len:171 (+),score=34.16,NUMOD3|PF07460.7|6.5e-06 S_Transcript_42943:215-727(+)
ATGTCATTGCCCCATTTGACATTTTTTGTTCAACCCCGGATTACTCATCGGGATTCTTGTGTCCGACTGTGGCCACTTTGTACTATGATTGACCATTCAGATCAAGAACATCGAGAATTAGCTGTGAGATTCTATTGTTGCAACACCCCGATGAAGTATTTACCTAGACCATCTGGTAGCCCTAGCTCCAGCATCAGGGTGCATCCTGTAGAAGCAGTGACTCTTGCTACAGAGGAAAGGGAGTCCCTCGATATGGGTTCTGAGCCAATTTCTAGACTAAATTCACGTTACGATGATGCATCAGTTGCTGTTGATGGACTAGCATGGCAGCATTCTGAGCCTGTGTTGACGAAGAGCATGGAGGAAGACAAGGAAACTCTAAGGAGGAGGAGAATAGGTTTGGCAAACAAGGGAAAAGTGCCTTGGAACAAAGGCAAGAAGCATACCGCAGAGACTCGTGCACGGATCAAGGAGGGAACCCTACAAGCCTTGAGAGATCCCAAGGTGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42943.p2 GENE.S_Transcript_42943~~S_Transcript_42943.p2 ORF type:complete len:171 (+),score=34.16,NUMOD3|PF07460.7|6.5e-06 S_Transcript_42943:215-727(+)
MSLPHLTFFVQPRITHRDSCVRLWPLCTMIDHSDQEHRELAVRFYCCNTPMKYLPRPSGSPSSSIRVHPVEAVTLATEERESLDMGSEPISRLNSRYDDASVAVDGLAWQHSEPVLTKSMEEDKETLRRRRIGLANKGKVPWNKGKKHTAETRARIKEGTLQALRDPKVK*

Click here to download the sequence:
Link to NCBI Protein BLAST