Transcript Information: S_Transcript_42948.p1


Annotated TAIR IDAT3G60590.3
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22398228-22399753 | Forward length=404
E-Value6.8E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.346183194009
Replicate 215.218493526899
Replicate 313.192614132795
Condition 2: 8 Hour
Replicate 134.478642009087
Replicate 232.659633050696
Replicate 331.118025700703
Condition 3: 24 Hour
Replicate 116.981606509112
Replicate 215.550352468443
Replicate 315.832816195912


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42948.p1 GENE.S_Transcript_42948~~S_Transcript_42948.p1 ORF type:complete len:274 (+),score=39.20 S_Transcript_42948:231-1052(+)
ATGTCAGCTCTTATGAGATCTCCCATATCCAACATAAGTGTAGCTGGACTCCATTATCAGATTAAGAAATACAGGAACTCTCCAAATTTTCATCTTGGACTTGCTCTTCCCAATATCCGAACTAGACATCTTACAGTTTTCTGCTCAAAATTGACACCATGGGAACCTACCCCTGTTACATATGCACCAACTGATGAGGCTGACGACGAATACTTGGAAGGAGCACCTAGTATATTCGACACCTTAACATCTGAGGTCATTGCGGGAACTCCAGTTGGTGATGCTGAAAAGACTAGTAAGCCATCACAAGAGGCAGGCTTTCTTAAGTGGCCACTGTGGATTCTGGGTCCTGCTTTCCTCCTTGCAACGGGGATGGTCCCCACTTTATGGCTACCCATATCTTCCATATATCTTGGACCTCAACATAGCCAGCCTGCTTTCCCTCATTGGGTTAGACTGCATCTTCAATTTTGGTGCAACCCTGTTTCTCCTCATGGCCCATTCAACAGCCCAACCGAAAGATCCGACCATTCCTTCAAAAAGCAATGCTCCTTTCAGTTACAAATTCTGGAACACCTTTGCATCCGTAATTGGTTATGCTATCCCCTTGGCGTTGCTTTTTGGTTCACAAAAGGGGTTCCTTCAACCCCAGCTTCCACCTATTGGATTCTTGATGCTTTTGGGTCCTTATCTCCTGCTTCTATCGGTTCAGATACTGACAGAACTGCTGATTTGGAATTGGAAATCACCCGTGTGGCTGGTAACCCCAGTTGTGTACGAGGCGTATCGAGTGCTGCAGCTCATGAGGGGTTTGAAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42948.p1 GENE.S_Transcript_42948~~S_Transcript_42948.p1 ORF type:complete len:274 (+),score=39.20 S_Transcript_42948:231-1052(+)
MSALMRSPISNISVAGLHYQIKKYRNSPNFHLGLALPNIRTRHLTVFCSKLTPWEPTPVTYAPTDEADDEYLEGAPSIFDTLTSEVIAGTPVGDAEKTSKPSQEAGFLKWPLWILGPAFLLATGMVPTLWLPISSIYLGPQHSQPAFPHWVRLHLQFWCNPVSPHGPFNSPTERSDHSFKKQCSFQLQILEHLCIRNWLCYPLGVAFWFTKGVPSTPASTYWILDAFGSLSPASIGSDTDRTADLELEITRVAGNPSCVRGVSSAAAHEGFEA*

Click here to download the sequence:
Link to NCBI Protein BLAST