Transcript Information: S_Transcript_42986.p1


Annotated TAIR IDAT3G52850.1
Annotated Gene Namevacuolar sorting receptor Homolog 1
Annotated Gene Symbol(s)VSR1, BP-80, ATELP, BP80, BP80B, ATELP1, ATVSR1, G
Annotation TypeOrtholog
Chromosome Positionchr3:19587999-19591690 | Forward length=623
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.974852374911
Replicate 231.608180285251
Replicate 329.257018731671
Condition 2: 8 Hour
Replicate 153.431762426921
Replicate 255.521893771493
Replicate 351.516113466872
Condition 3: 24 Hour
Replicate 138.843041642546
Replicate 235.378533126311
Replicate 338.412653998917


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_42986.p1 GENE.S_Transcript_42986~~S_Transcript_42986.p1 ORF type:complete len:631 (+),score=127.71,PA|PF02225.18|1e-12 S_Transcript_42986:310-2202(+)
ATGAAGAAAAAGGCAGGATTTTGGGGGACAATTTGGTCTTTTCTTGTGATCATGATGATGGTAGCTAGGCCCTGTTTGGGGAGGTTTGTGGTGGAGAAAAACAGCTTAAGGGTGACATCACCAAGCTCATTAAGAGGTGTTTATGAATGTGCAATTGGGAATTTCGGGGTTCCTCAGTATGGGGGTACAATGGGTGGAATTGTGGTTTATCCTAAATCTAATCAAAAGGCTTGTAAACCTTTCTCTGATGGTGATATTACCTTCAATTCTAAGCCTGGTGGTTTGCCTGTCTTTATTCTCATTGATCGTGGTGAATGTTATTTTACCTTGAAAGCGTGGAATGCGCAGAAAGGTGGAGCAGCTGCTGTCCTTGTAGCAGATGATAGAATTGAGCCCTTGATTACCATGGACAACCCTGAAGAAGGAGATTCTCAGGATGATTATGTACAGAATATCACCATTCCGTCAGCGCTTATTAGCAAGTCTGTTGGAGATAAGCTCAAGAGAGCTATATCAAGTGGTGAGGCTGTGAACATCAAACTTGACTGGAGGGAGACACTTCCACATCCTGATGAGCGAGTTGAGTACGAATTTTGGACCAATAGCAATGATGAGTGTGGGCCAAAGTGTGATGCCCAAATAGAATTTGTGAAGGAATTCAAAGGAGCTGCTCAGATACTAGAAAAGAATGGATATACCCATTTTACACCTCACTATATCACGTGGTATTGTCCTGAAGCTTTTATATTGAGCAAACAGTGCACATCTCAATGTATCAATCATGGAAGGTATTGTGCACCAGACCCTGAGCAAGATTTCAGCAGAGGTTATGATGGGAAGGATGTTGTGCTCCAGAACCTACGCCAAGCTTGCTTGTTCAAAGTGGCCAATGAAAGTGGAAAGCCTTGGCTGTGGTGGGACTATGTTTCTGATTTTGCAATCCGTTGCCCTATGAAAGCGAATAAGTACACTAAAGAGTGTGCTGATCAAGTCCTCCGTTCTCTTGGTGTTGATCTTTCAAAAGTAGACGAATGTATTGGAGACCCTGACTCTGATGTAGAAAATCCAGTCCTTAAGGCAGAGCAGGAGGCACAGATTGGTCATGGTCCGCGGGGAGATGTGACTATATTGCCAACTCTTGTAGTTAACAACAGGCAGTATAGAGGCAAATTGGTGAAGAATGCTGTTCTCAAGGCAATCTGTTCTGGTTTTGAAGAGACAACTGAACCATCCCTCTGTTTGACCCCAGACATAGAAACAAATGAATGCCTGGAGAACAATGGTGGATGCTGGGAGGATAAGGCTTCCAATCTGACTGCATGCAGGGATACATATCGAGGCAGAGTCTGTGAATGTCCTACAGTGCAAGGAGTCAGATTTGTTGGTGATGGTTATGTTCATTGTGAAGCTTCTGGGCTCTTGCACTGTAAAATTAACAATGGTGGATGTTGGAAGGATACTCGTGGTGGCAGGACATATTCTGCTTGTGAAGATGAGCGCACACATGGTTGCAAATGTCCACCAGGATTCAAGGGTGATGGAGTAAACTCTTGTGAAGATGTTGATGAGTGCAAGGAAAAACTAGCCTGCCAATGCCCAGAATGTAACTGTAAGAACACTTGGGGAAGTTATGAATGCACTTGCGGTAACGGTTTGCTGTACATGCAAGAGCACGATTTATGCATAAGTATGAATGGCAGTTCAGGTGCCGGCTGGGGCTTTGTGTGGGTGGTAATTCTGGGTTTGGCTGCTGCTGGGATAGGCGGATATGCTGTCTACAAGTACAGGATTCGGAGGTACATGGACTCGGAAATAAGGGCAATTATGGCTCAGTACATGCCTCTCGATAATCAGGTGGAGATCTCGAGTCACAATCCCCAAGAAGATATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_42986.p1 GENE.S_Transcript_42986~~S_Transcript_42986.p1 ORF type:complete len:631 (+),score=127.71,PA|PF02225.18|1e-12 S_Transcript_42986:310-2202(+)
MKKKAGFWGTIWSFLVIMMMVARPCLGRFVVEKNSLRVTSPSSLRGVYECAIGNFGVPQYGGTMGGIVVYPKSNQKACKPFSDGDITFNSKPGGLPVFILIDRGECYFTLKAWNAQKGGAAAVLVADDRIEPLITMDNPEEGDSQDDYVQNITIPSALISKSVGDKLKRAISSGEAVNIKLDWRETLPHPDERVEYEFWTNSNDECGPKCDAQIEFVKEFKGAAQILEKNGYTHFTPHYITWYCPEAFILSKQCTSQCINHGRYCAPDPEQDFSRGYDGKDVVLQNLRQACLFKVANESGKPWLWWDYVSDFAIRCPMKANKYTKECADQVLRSLGVDLSKVDECIGDPDSDVENPVLKAEQEAQIGHGPRGDVTILPTLVVNNRQYRGKLVKNAVLKAICSGFEETTEPSLCLTPDIETNECLENNGGCWEDKASNLTACRDTYRGRVCECPTVQGVRFVGDGYVHCEASGLLHCKINNGGCWKDTRGGRTYSACEDERTHGCKCPPGFKGDGVNSCEDVDECKEKLACQCPECNCKNTWGSYECTCGNGLLYMQEHDLCISMNGSSGAGWGFVWVVILGLAAAGIGGYAVYKYRIRRYMDSEIRAIMAQYMPLDNQVEISSHNPQEDI*

Click here to download the sequence:
Link to NCBI Protein BLAST