Transcript Information: S_Transcript_429917.p1


Annotated TAIR IDAT1G80150.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30148738-30149931 | Forward length=397
E-Value4.2E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68945599054872
Replicate 21.4860946334077
Replicate 31.0511403985472
Condition 2: 8 Hour
Replicate 11.1049425034784
Replicate 22.5501589123004
Replicate 30.55222403121713
Condition 3: 24 Hour
Replicate 10.45274369928693
Replicate 20.58714537762558
Replicate 30.52273667160862


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_429917.p1 GENE.S_Transcript_429917~~S_Transcript_429917.p1 ORF type:5prime_partial len:193 (-),score=17.35,PPR_2|PF13041.2|0.0084,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|2.3e-07,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|22,PPR|PF01535.16|0.025,PPR|PF01535.16|35,PPR|PF01535.16|0.0017,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.99,PPR_3|PF13812.2|63,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.98,PPR_3|PF13812.2|0.053 S_Transcript_429917:169-747(-)
GAAGGATTCGTTGTTAGGATTATTATGTTGTACGGTAAAGCTGGTATGGTTGAGCAGGCTGTTAATACTTTCTATAATATGCATTTGTTTGGTTGTAAAAGGACTGTTAAATCATTCAATGCTGCTTTGAAGGTTTTGAGTCAAACTCGGGACTTAGAGTTTATATATTCGTTTTTTGATGAGGTGCCTTGCAAGTTTGGGATCACAGTGGATGTGATCTCGGTCAATATTGTGATTAATGTGTTTTGCTGGATGGGGATACTTGATAAGGCTTATTTGGTGTTGGTACAGATGGAGAAGATGGGGGTAGACCCTGATGTTGTTAGTTATACAACGCTTATATCGGCGTTTTATAAATGTGGTTGGTGGCAGATTGGGAACGGGTTGTGGAATCGAATGGTTTATAAAGGATGTTATCCAAATGTCGCTACTTTCAATGCGAGGATTCAATTTTTGGTTAGTAGGGGTCGAGCGTGGGAAGCTAATGACCTGTTGCTCTTGATGGAAGATATAGGGATGCAACCAGATGAGGTTACTTATGTTTGTTATCAAAGGGTTTGGGCAGGCTGGGATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_429917.p1 GENE.S_Transcript_429917~~S_Transcript_429917.p1 ORF type:5prime_partial len:193 (-),score=17.35,PPR_2|PF13041.2|0.0084,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|2.3e-07,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|22,PPR|PF01535.16|0.025,PPR|PF01535.16|35,PPR|PF01535.16|0.0017,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.99,PPR_3|PF13812.2|63,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.98,PPR_3|PF13812.2|0.053 S_Transcript_429917:169-747(-)
EGFVVRIIMLYGKAGMVEQAVNTFYNMHLFGCKRTVKSFNAALKVLSQTRDLEFIYSFFDEVPCKFGITVDVISVNIVINVFCWMGILDKAYLVLVQMEKMGVDPDVVSYTTLISAFYKCGWWQIGNGLWNRMVYKGCYPNVATFNARIQFLVSRGRAWEANDLLLLMEDIGMQPDEVTYVCYQRVWAGWDF*

Click here to download the sequence:
Link to NCBI Protein BLAST