Transcript Information: S_Transcript_429968.p1


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.08755075221236
Replicate 30.21955638194763
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_429968.p1 GENE.S_Transcript_429968~~S_Transcript_429968.p1 ORF type:3prime_partial len:252 (+),score=23.62,LRR_8|PF13855.2|1.3e-05,LRR_8|PF13855.2|1.1e-06,LRR_8|PF13855.2|5.4e-08,LRR_8|PF13855.2|9.3e-06,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|6e+02,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|0.0089,LRR_4|PF12799.3|3.8e-05,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|1.2e+03,LRR_1|PF00560.29|2.2,LRR_1|PF00560.29|18,LRR_1|PF00560.29|23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|2.3,LRR_1|PF00560.29|84,LRR_1|PF00560.29|7.2 S_Transcript_429968:110-754(+)
ATGGGAGAGCTCCCACACCTCCGATCCCTTGTCTTTTCCGACTTTCCCCATCTCTCAGGCCCTATCCCTTCGACAATTGCCAAGCTAACCAACCTCCAACGCCTCGATCTCAGCTTGAACAATTTGAATGGGCCAATCCCGACGTTCCTAGCCCAACTCAAGGGACTCGATTACATTGATCTTGACTCAAATAACCTCACTGGCCCAATCCCATCTGGATTGGGCCAGCTTTCCAAGCTCACATTCGTCAACTTAGGTTCAAACAAGTTGTCCGGTCCAATCCCGGAGTCCTTAGGCCGAATCAAGAGCCTCAACCAACTCTACATCTATGATAACAATCTCTCAGGTTCGATTCCTCCCTCTTTCTCGCAACTTCCTAAACTCAACGAGCTTGACCTCCGCCGAAACAAGCTCACCGGCTCAATCCCAGAGAGATTTGGCTCATTCCGAAACCCTGCCTTGAATCTCGCCTTGTCCTTCAACAATCTATCCGGCCCCATTCCCAAATCCTTTGGCAAAGCCAATTTAACACAATTGGATCTTTCCAGCAATAAATTCACGGGTGATGCATCGTTTTTGTTCGGGAGAGACAAAACGGTGTTCAACACCATCGATTTGAGTAATAATCTTTTCAAGTTTGACTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_429968.p1 GENE.S_Transcript_429968~~S_Transcript_429968.p1 ORF type:3prime_partial len:252 (+),score=23.62,LRR_8|PF13855.2|1.3e-05,LRR_8|PF13855.2|1.1e-06,LRR_8|PF13855.2|5.4e-08,LRR_8|PF13855.2|9.3e-06,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|6e+02,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|0.0089,LRR_4|PF12799.3|3.8e-05,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|1.2e+03,LRR_1|PF00560.29|2.2,LRR_1|PF00560.29|18,LRR_1|PF00560.29|23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|2.3,LRR_1|PF00560.29|84,LRR_1|PF00560.29|7.2 S_Transcript_429968:110-754(+)
MGELPHLRSLVFSDFPHLSGPIPSTIAKLTNLQRLDLSLNNLNGPIPTFLAQLKGLDYIDLDSNNLTGPIPSGLGQLSKLTFVNLGSNKLSGPIPESLGRIKSLNQLYIYDNNLSGSIPPSFSQLPKLNELDLRRNKLTGSIPERFGSFRNPALNLALSFNNLSGPIPKSFGKANLTQLDLSSNKFTGDASFLFGRDKTVFNTIDLSNNLFKFDF

Click here to download the sequence:
Link to NCBI Protein BLAST