Transcript Information: S_Transcript_429969.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeHomolog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56623406883363
Replicate 20.2347105272076
Replicate 30.39239864007661
Condition 2: 8 Hour
Replicate 10.11343292721879
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.11619618877976
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_429969.p1 GENE.S_Transcript_429969~~S_Transcript_429969.p1 ORF type:internal len:188 (+),score=18.94,LRR_8|PF13855.2|0.019,LRR_8|PF13855.2|5.5e-07,LRR_8|PF13855.2|1.4e-08,LRR_4|PF12799.3|1.4e+02,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.0046,LRR_4|PF12799.3|0.0001,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|12,LRR_1|PF00560.29|15,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|0.12 S_Transcript_429969:2-562(+)
ACTGATTGTTGTAAGAATTGGTCTGGAATCCAGTGTGATGCCCAAGGTCACGTCACTGTGCTTGCTGTAAGCATTGCTGATGATGTCATGGGCGAAATCCCGCCTGTAATGGGAGAGCTCCCACACCTCCGATCCCTTGTCTTTTCCGACTTTCCCCATCTCTCAGGCCCTATCCCTTCGACAATTGCCAAGCTAACCAACCTCCAACGCCTCGATCTCAGCTTGAACAATTTGAATGGGCCAATCCCGACGTTCCTAGCCCAACTCAAGGGACTCGATTACATTGATCTTGACTCAAATAACCTCACTGGCCCAATCCCATCTGGATTGGGCCAGCTTTCCAAGCTCACATTCGTCAACTTAGGTTCAAACAAGTTGTCCGGTCCAATCCCGGAGTCCTTAGGCCGAATCAAGAGCCTCGACCAACTCTACCTCTATGATAACAATCTCTCAGGCTCGATTCCTCCCTCTTTCTCGCAACTTCCTAAACTCAATGAGCTTGACCTCCGCCAAAACCAGCTCACCGGTTCAATCCCAGCAAACTTCGGCTCGTTTCGAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_429969.p1 GENE.S_Transcript_429969~~S_Transcript_429969.p1 ORF type:internal len:188 (+),score=18.94,LRR_8|PF13855.2|0.019,LRR_8|PF13855.2|5.5e-07,LRR_8|PF13855.2|1.4e-08,LRR_4|PF12799.3|1.4e+02,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.0046,LRR_4|PF12799.3|0.0001,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|12,LRR_1|PF00560.29|15,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|0.12 S_Transcript_429969:2-562(+)
TDCCKNWSGIQCDAQGHVTVLAVSIADDVMGEIPPVMGELPHLRSLVFSDFPHLSGPIPSTIAKLTNLQRLDLSLNNLNGPIPTFLAQLKGLDYIDLDSNNLTGPIPSGLGQLSKLTFVNLGSNKLSGPIPESLGRIKSLDQLYLYDNNLSGSIPPSFSQLPKLNELDLRQNQLTGSIPANFGSFRN

Click here to download the sequence:
Link to NCBI Protein BLAST