Transcript Information: S_Transcript_430468.p1


Annotated TAIR IDAT5G11620.1
Annotated Gene NameSWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3739076-3740127 | Reverse length=273
E-Value8.7E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61890700546931
Replicate 20.17102937641484
Replicate 30
Condition 2: 8 Hour
Replicate 10.16531310323359
Replicate 20.34685036650739
Replicate 30.16523912872079
Condition 3: 24 Hour
Replicate 10.33868036419526
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_430468.p1 GENE.S_Transcript_430468~~S_Transcript_430468.p1 ORF type:3prime_partial len:129 (+),score=0.21,SWIM|PF04434.13|1.6e-07 S_Transcript_430468:143-526(+)
ATGGAACCATATACCCGCAATCCCTCACCAGCATTAGACCACAACCGAGAAAGGGGTCGTAGTAGGCCCTACTACGAGCCCATCCATTTTGTGAACCGGGTTGCAAGGGCTATGAACCATCGTCTCCTTCTCCTATATAGATCCGACCCTGATTTCTACGTGCTAGGAGCGACAGGGAATGTATACACGGTCAAGCTATGGAGGAACATTACATGTACATGCCCTGACCGTGCCATCCCTTGCAAACACATCCTATTTGTGCTCATCAAGGTTCTTGGACTTTCCCTAGATGATGAATGCCTAAAGAGACGAACCTTGAGGCCCTGTCAAGTGGCTCGACTCCTGGCTAACCCTACCTCCCCCAAGTCCCTTGCAGGGCCTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_430468.p1 GENE.S_Transcript_430468~~S_Transcript_430468.p1 ORF type:3prime_partial len:129 (+),score=0.21,SWIM|PF04434.13|1.6e-07 S_Transcript_430468:143-526(+)
MEPYTRNPSPALDHNRERGRSRPYYEPIHFVNRVARAMNHRLLLLYRSDPDFYVLGATGNVYTVKLWRNITCTCPDRAIPCKHILFVLIKVLGLSLDDECLKRRTLRPCQVARLLANPTSPKSLAGPS

Click here to download the sequence:
Link to NCBI Protein BLAST