Transcript Information: S_Transcript_43062.p1


Annotated TAIR IDAT3G02420.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:496179-498772 | Reverse length=348
E-Value8.3E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.654130045582
Replicate 240.668446848183
Replicate 337.043102390138
Condition 2: 8 Hour
Replicate 142.225487949879
Replicate 237.413889320568
Replicate 334.858394658858
Condition 3: 24 Hour
Replicate 139.457709780731
Replicate 239.387250887669
Replicate 336.647414947605


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43062.p1 GENE.S_Transcript_43062~~S_Transcript_43062.p1 ORF type:complete len:351 (+),score=46.80,UPF0121|PF03661.9|2.7e-16 S_Transcript_43062:195-1247(+)
ATGGGAGAAGAAGGGCAAACGGATCCCCAAAAGCTGAAGAGAATAGCAGCAGCAGCATACGACTATGACAACGACCCCAGATGGGCTGATTACTGGTCCAACATCCTCATTCCTCCTCACATGGCTTCTCGTTCTGACGTCATTGATCACTTCAAGCGCAAGTTCTATCAGCGCTACATCGATCCTGGTCTAGCAGTTGAGCCAATGTCTCTTAGCGGCTCCTCTCAGCCAGCTAGGCAAACATCATCATCTTCATCAACATCATCACCTGCTAGTGACCAAGCAAGACCTCGTAGCACAGGTTCGGGTACTAGAGCTTCTGGAGCTGGAGCATCAACAGATACAGGTTCTGCTCCACCACCAACTGCAATGCGCTGGGACCGACAAACCATTCAATTTTCAGTCAATGCTTGGGTTTTTGTCTTGGCTTTGCTTTCAATCTTTCCCCTTATACCTAGCAATCTTTCCAATAGGGCTTATCGCCTGTCCTTTATGGGCACTGCATGTTCCTCGCTGTATTCATTGTACTCACTATATGGGAGACCTAGGGCATGGAATTTACAGGCTGTTCAGATGTGGTTTCAATCAGTCATTGCAACAAAAGATTTCATCTATTTTATTTACTCCCTCATGTTTGTCTCTTCACAGCTTTGCCTCAAATTTGCTCTGCTTCCCATTCTATGTCGGTCACTAGAGCATGTTGCCAAGTTTCTAAGACGCAATTTCAGTCGCTCTAACTTGTACAGGAAATACCTGGAAGAGCTGTGTGTGTGGGTTGAATCCAATATTACCACCCTTAGCATATTGTCATCGCATGCCGAGGTTGGACTTGGGTTCCTCTTAATCATCTCCCTGTTCTCATGGCAACGCAACTTTATTCAAACTTTCATGTACTGGCAGCTGTTAAAGCTTATGTATCATGCTCCTGTTACTGCTGGTTATCACCAGAGTGTATGGACTAAGATAGGAAGGAGTGTCAACCCCGCCATCCACCGTTATGCTCCTTTCTTGAACACTCCTCTCTCTGTTGTTCAAAGATGGTGGTTTAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43062.p1 GENE.S_Transcript_43062~~S_Transcript_43062.p1 ORF type:complete len:351 (+),score=46.80,UPF0121|PF03661.9|2.7e-16 S_Transcript_43062:195-1247(+)
MGEEGQTDPQKLKRIAAAAYDYDNDPRWADYWSNILIPPHMASRSDVIDHFKRKFYQRYIDPGLAVEPMSLSGSSQPARQTSSSSSTSSPASDQARPRSTGSGTRASGAGASTDTGSAPPPTAMRWDRQTIQFSVNAWVFVLALLSIFPLIPSNLSNRAYRLSFMGTACSSLYSLYSLYGRPRAWNLQAVQMWFQSVIATKDFIYFIYSLMFVSSQLCLKFALLPILCRSLEHVAKFLRRNFSRSNLYRKYLEELCVWVESNITTLSILSSHAEVGLGFLLIISLFSWQRNFIQTFMYWQLLKLMYHAPVTAGYHQSVWTKIGRSVNPAIHRYAPFLNTPLSVVQRWWFR*

Click here to download the sequence:
Link to NCBI Protein BLAST