Transcript Information: S_Transcript_430649.p2


Annotated TAIR IDAT2G36980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:15531161-15533038 | Forward length=625
E-Value2E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7564418955736
Replicate 21.5962741798719
Replicate 31.6202920590243
Condition 2: 8 Hour
Replicate 12.2041747097812
Replicate 22.8904197208949
Replicate 32.864144897827
Condition 3: 24 Hour
Replicate 11.8627420030739
Replicate 21.229819232825
Replicate 31.3686380684947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_430649.p2 GENE.S_Transcript_430649~~S_Transcript_430649.p2 ORF type:complete len:387 (-),score=54.54,PPR_2|PF13041.2|0.85,PPR_2|PF13041.2|4.4e-09,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|2.7e-05,PPR|PF01535.16|0.29,PPR|PF01535.16|0.0077,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|0.02,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|4e+03,PPR|PF01535.16|5.9e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.0019,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|14,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|89,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|15,PPR_1|PF12854.3|46,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|1.1 S_Transcript_430649:1440-2600(-)
ATGTGTTCTAGTTTGTTTAAGGCCACATCTCAAATTGTTGCCTCTGCAAGATCAGGTAGAATCACGGATGCCCGCAAGCTGTTCGACGAAATGACTAACAGAGACACAGTTGCTTGGAATGCCATTCTTTCTTCCTATTCTCATTTGGGTATTTACCAACAAGTCTTCTCTTTGTTCAAACTAATGAGAATCTCCAATACTAAGCCTGATCAGTTCACCTTTACGGCCACACTCAGTGCATGTGCTGGAGAAGGGGATGTGAGATATGGTTCAATAATTCATGCCTTAGTAGTGGGTTATGGGTGCCAGAATTCCGTGCCTGTGAGAAACTCTCTTATCGACATGTATGGAAAGTGTTTGAGTCCTTGTAGTGCCAGAAAAGTGTTCGAGGAGATGTGTTTAAGGAACGAAGTGTCGTGGTGTTCACTGTTGTTTTCCTATGTTAATGCTGGTCTATTTGATGCTGCTAATGATGTATTCTGGAGTATGCCGGAAAGGGTTGGAATTTCTTGGAACATAATGATTGCAGGTCATGCTCGATCAAGAGATTGTGAGTTGTGCTTGAGCTTATTTAGACAAATGAGAGAAAGTAATGGTTGTTACCCTGATCAATGGACTTTGAGTGCCCTCATGAACTCATGTACAGAAAGCAGCGAGTCTTTTTGTGGTCGTATGATCCATGCTTCTCTGGTTAAAAGTGGGTGGCATTCATCCATCGAAGTGAAAAACTCGATTTTAAGCTTCTATGCCCAACTGGGAAGTCGAGATGATATCCAGAAGGCACTTGAGTCCATTGACTATTCATTAGATCAGATTTCCTTGAATGCTGTCATTGATGCTCATATGAAGATGGGGAATACCAATGAAGCCGAGCTTCTCTTTCAACGAATACCAGAGAAAAATATCATTTCTTGGACATCTATGATTGCTGGGTTCACAAGAAATGGACAGGAAACACAAGCCATTAGCTTCTTTGTTGATTTGATGAGACATTCTGTTAGACCTGATGAGCTAGCCTTTGGTGCAGTCCTCCTTGCATGTTCTAGTTTAGCTGTACTTGGACATGGTATGATGATCCATGGTTGCTTGATACGAAATGGTTTCGATGCCTCCATAATCAATGAAAGGATTAAACTGAATAAGTGGTGGGATATTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_430649.p2 GENE.S_Transcript_430649~~S_Transcript_430649.p2 ORF type:complete len:387 (-),score=54.54,PPR_2|PF13041.2|0.85,PPR_2|PF13041.2|4.4e-09,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|2.7e-05,PPR|PF01535.16|0.29,PPR|PF01535.16|0.0077,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|0.02,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|4e+03,PPR|PF01535.16|5.9e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.0019,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|14,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|89,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|15,PPR_1|PF12854.3|46,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|1.1 S_Transcript_430649:1440-2600(-)
MCSSLFKATSQIVASARSGRITDARKLFDEMTNRDTVAWNAILSSYSHLGIYQQVFSLFKLMRISNTKPDQFTFTATLSACAGEGDVRYGSIIHALVVGYGCQNSVPVRNSLIDMYGKCLSPCSARKVFEEMCLRNEVSWCSLLFSYVNAGLFDAANDVFWSMPERVGISWNIMIAGHARSRDCELCLSLFRQMRESNGCYPDQWTLSALMNSCTESSESFCGRMIHASLVKSGWHSSIEVKNSILSFYAQLGSRDDIQKALESIDYSLDQISLNAVIDAHMKMGNTNEAELLFQRIPEKNIISWTSMIAGFTRNGQETQAISFFVDLMRHSVRPDELAFGAVLLACSSLAVLGHGMMIHGCLIRNGFDASIINERIKLNKWWDIV*

Click here to download the sequence:
Link to NCBI Protein BLAST