Transcript Information: S_Transcript_43114.p1


Annotated TAIR IDAT5G02030.1
Annotated Gene NamePOX (plant homeobox) family protein
Annotated Gene Symbol(s)LSN, PNY, HB-6, BLR, RPL, BLH9, VAN
Annotation TypeHomolog
Chromosome Positionchr5:395754-398872 | Forward length=575
E-Value2E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.805393790606
Replicate 215.570750331395
Replicate 311.235230027941
Condition 2: 8 Hour
Replicate 19.657705499943
Replicate 29.0001689929935
Replicate 311.956475438196
Condition 3: 24 Hour
Replicate 110.294715208211
Replicate 212.556272620459
Replicate 314.785336375413


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43114.p1 GENE.S_Transcript_43114~~S_Transcript_43114.p1 ORF type:complete len:435 (+),score=56.68,POX|PF07526.7|1.9e-25,Homeobox_KN|PF05920.7|3.3e-18,Homeobox|PF00046.25|9.6e+03,Homeobox|PF00046.25|1.1e-08 S_Transcript_43114:438-1742(+)
ATGGAAGACACTTCTTTCCGCCCATTTTACATCACTCAACAAAGCAGAAGACACAAGCTCCGTTCCACTCCTCTAAACGACGACGTCGAATTCACTCTCATGTCCCCACCACAACCAGAACCAGTACTCACTTGTTCTACTTTAGCCGCGACAACATCAACCTGTGGTGGTGGACTGAATTTATCTCTCTCCACCCACACGCGCTCTTCCGGCGCCTATAATGTAACCCCGGTGGGTCCCTTCACTGGCTACGCCTCCATTCTTGGCCGATCTAGGTTTCTAAGGCCCGCTCAGGAGCTTCTCGAAGATTTCTGCCGTGATAATGGAGTTTCCTTTGACAAGGAAACCTCCAAGCTTCTCCAAGATTCTGGAAACTGGTTCGCTCATGATGAGGCTGACATTTCTCGCCGTTGTAACAACCCTACCCTCCTCTCCTTGCTCCATGAGGTCTACAAGAGATATAAACTATACTGCCAACAGATGCACTCAGCTGTTACATCGTTTGAATCTGTGGCTGGTCTTGAGAATGCTGCCCCATTCACATGCTTTGCGATCAAAGCCATGTTCAGGCACTTCCACAGCTTGAAAAATGCCATTCTGGATCATATTCGTGTTACCAGTAAAGTTTTTGGTTGTGCAGACATTAGGAGAGATTGTACTTCAGGTTCATGCTCAGCAGATAAAGGCCGCTGTGAGCAGAAGCAGACTCTTGATTCTAACTTCATTCAGCATCCTGTGTGGAGATCCCAGAGAGGATTTCCGGATAAAGCAGTAGCTGTGCTGCGGACTTGGCTTTTTGAGCACTTTCTACACCCCTATCCTAGTGATTCTGACAAGCAAATGTTGGCACAGAAGACTGGTCTATCTAGAAGTCAGGTGTCTAATTGGTTCACCAATGCCAGAGTTAGGCTGTGGAAGCCAATGGTGGAAGAAATGCATTTCCTTGAGAGAAAAGCTCAATGCTCCAACGCCGCTGATACTTCAAAATTTGATTTGCCAATTGACCATCAATTTTCCGCGCAACCTCAGCTCTCTCAGGAGGATTGTCATGTTTACATGCATAGAGATCACGAAGGCCATTGTAAGCGTAGTAGGATTGAAGTGTTCTCAAGAGCAGAACAGAGCAAGGAACAATTTGGCATCCCTTGCAACCACCTTCCTAGCAACCAGGCCATTGGTTTTGTTGGCAGCGAAACGACAGATATTCGTCACTCTACTGTATTAGGCAGCAATCAAGAAACCGCAACTGGATTATCATGGTCTACTCCTGGGCAGATTGTTCCTTTTTGGTTAGCGAAACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43114.p1 GENE.S_Transcript_43114~~S_Transcript_43114.p1 ORF type:complete len:435 (+),score=56.68,POX|PF07526.7|1.9e-25,Homeobox_KN|PF05920.7|3.3e-18,Homeobox|PF00046.25|9.6e+03,Homeobox|PF00046.25|1.1e-08 S_Transcript_43114:438-1742(+)
MEDTSFRPFYITQQSRRHKLRSTPLNDDVEFTLMSPPQPEPVLTCSTLAATTSTCGGGLNLSLSTHTRSSGAYNVTPVGPFTGYASILGRSRFLRPAQELLEDFCRDNGVSFDKETSKLLQDSGNWFAHDEADISRRCNNPTLLSLLHEVYKRYKLYCQQMHSAVTSFESVAGLENAAPFTCFAIKAMFRHFHSLKNAILDHIRVTSKVFGCADIRRDCTSGSCSADKGRCEQKQTLDSNFIQHPVWRSQRGFPDKAVAVLRTWLFEHFLHPYPSDSDKQMLAQKTGLSRSQVSNWFTNARVRLWKPMVEEMHFLERKAQCSNAADTSKFDLPIDHQFSAQPQLSQEDCHVYMHRDHEGHCKRSRIEVFSRAEQSKEQFGIPCNHLPSNQAIGFVGSETTDIRHSTVLGSNQETATGLSWSTPGQIVPFWLAKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST