Transcript Information: S_Transcript_431224.p1


Annotated TAIR IDAT4G11690.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7056254-7057954 | Forward length=566
E-Value5.2E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47523216491394
Replicate 20.24623649059726
Replicate 30.4116682161518
Condition 2: 8 Hour
Replicate 10.71401976508258
Replicate 20.8489317564182
Replicate 30.90402032253269
Condition 3: 24 Hour
Replicate 10.097521801297295
Replicate 20.15176659537733
Replicate 30.33779523756852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_431224.p1 GENE.S_Transcript_431224~~S_Transcript_431224.p1 ORF type:complete len:448 (+),score=80.60,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|4.6e-15,PPR_2|PF13041.2|3.3e-15,PPR_2|PF13041.2|8.7e-21,PPR_2|PF13041.2|5.2e-19,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|5.2e-12,PPR_2|PF13041.2|6.1e-10,PPR_1|PF12854.3|21,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|3.5e-11,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|5.2e-13,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|1.9e-13,PPR_1|PF12854.3|7.4e-08,PPR_1|PF12854.3|3.4e-09,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|2.9e-08,PPR_1|PF12854.3|9.3e+03,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0079,PPR|PF01535.16|3.2e-11,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|5.5e-10,PPR|PF01535.16|6.8e-09,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.00013,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|1.3e-06,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|9.8e-06,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|7.2e-07,PPR_3|PF13812.2|8e-06,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.00051 S_Transcript_431224:480-1823(+)
ATGATCAATCATGGGTGTGTACCAAGATCAAATCTTTTTAATTCCTTGTTGGGTCTTCTCTTAGAAAGCAATAATCTTGAAAGGGCTTGGTGGGTTTTTGATGAATTTAAGTGTAGTATTGAAATGGATGAGTATAGTTTTGGAATTATGATCAAGGGGTTTTGTGAAGCAAATGATTTGGATAGGGCTTTTAGGGTTTTGGGTAGATTGGGGGATGTGGGTTTGTCTCCAAATGTTATTTATACTACTTTGATTGATGGATGTTGTAAAAATGGTGATATTGATAAAGCAAAGGAGTTGTTTTGTAAGATGGAGGAATTAGGGTTAGTTGCTAATCAGCATACTTATACTGTTTTGATGAATGGGTTCTTCAAGAAAGGGATGAAAAAAGAAGGGTTTGAGTTGTATGAGAAGATGAGGCTGAATGGAATTATGCCTAATGTTTATACCTACAATTCCATGATCAATGAGTATTGTAAAAGTGGGTTATTAGGTAAAGCCTTCCTACTGTTTGATGAAATGCTTGAGAGAGGATTGGTATGCAATGTTGTGACCTACAATATATTGATTAGGGGCCTGTGCAAGGAGAAGAAGCTTTGGGAGGCTAAAGAATTGTTGCGACGGATGAAGGGTTATGGTCTGAGTCCGAACTTGATCACCTATAACACCCTTATTGATGGGTTCTGTAATGTTGGAAAGTTGAGCCCGGCTTTGAATTTGTTTGATCAAATGAAGGCGGAAGGTCTAATGCCGTCTTTGGTGTCCTATAATGTTCTTATTTCAGGTTTTTCTAAAGCTGGGAATTCCAATAGGGCTGCCAATTTAGTGAGGGAGATGGAAGAGAGAGGGATCACCCCATCTAAAGTGACATACACGATTCTAATAGATGCATGTATTCGATCAGGTAACATGGACAAGGCATTTGAAATGTTTAATTCTATGGAGAAGGCTAGCTTGGCAGCAGATGCGTACACTATTGGTGCCTTGATAAATGGACTGTGTAGCATTGGTAATATGTTAGAAGCATCAAAGTTGTTCAAGTCAATGGAGGACATGCATTTGCATCCAAACGGTGTGATTTATAACATGATGATTAATGGTTATTGTAAAGAGGGGAGTTCTTATAGAGCCCTGAGATATCTGAGAGACATGAGGTATCAAGGAATGATTCCAAATGTTGCTAGCTACTGCTCAACTATAAGAGTCCTCTGTAAAGATGGGAAGTTAAAAGAGGCTGAAGAACTGCTCGAGGAGATGGTAAGCTTAGGTCTTAAACCATCGAATTCTGTTTACAAAACTCTTTCTCAAGCTAAAGAAGATGATAAGCTCTCCCTCCCACCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_431224.p1 GENE.S_Transcript_431224~~S_Transcript_431224.p1 ORF type:complete len:448 (+),score=80.60,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|4.6e-15,PPR_2|PF13041.2|3.3e-15,PPR_2|PF13041.2|8.7e-21,PPR_2|PF13041.2|5.2e-19,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|5.2e-12,PPR_2|PF13041.2|6.1e-10,PPR_1|PF12854.3|21,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|3.5e-11,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|5.2e-13,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|1.9e-13,PPR_1|PF12854.3|7.4e-08,PPR_1|PF12854.3|3.4e-09,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|2.9e-08,PPR_1|PF12854.3|9.3e+03,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0079,PPR|PF01535.16|3.2e-11,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|5.5e-10,PPR|PF01535.16|6.8e-09,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.00013,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|1.3e-06,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|9.8e-06,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|7.2e-07,PPR_3|PF13812.2|8e-06,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.00051 S_Transcript_431224:480-1823(+)
MINHGCVPRSNLFNSLLGLLLESNNLERAWWVFDEFKCSIEMDEYSFGIMIKGFCEANDLDRAFRVLGRLGDVGLSPNVIYTTLIDGCCKNGDIDKAKELFCKMEELGLVANQHTYTVLMNGFFKKGMKKEGFELYEKMRLNGIMPNVYTYNSMINEYCKSGLLGKAFLLFDEMLERGLVCNVVTYNILIRGLCKEKKLWEAKELLRRMKGYGLSPNLITYNTLIDGFCNVGKLSPALNLFDQMKAEGLMPSLVSYNVLISGFSKAGNSNRAANLVREMEERGITPSKVTYTILIDACIRSGNMDKAFEMFNSMEKASLAADAYTIGALINGLCSIGNMLEASKLFKSMEDMHLHPNGVIYNMMINGYCKEGSSYRALRYLRDMRYQGMIPNVASYCSTIRVLCKDGKLKEAEELLEEMVSLGLKPSNSVYKTLSQAKEDDKLSLPP*

Click here to download the sequence:
Link to NCBI Protein BLAST