Transcript Information: S_Transcript_43140.p1


Annotated TAIR IDAT5G46880.1
Annotated Gene Namehomeobox-7
Annotated Gene Symbol(s)HB-7, HDG5
Annotation TypeOrtholog
Chromosome Positionchr5:19031540-19035388 | Forward length=826
E-Value4.8E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5514750348508
Replicate 23.5942846072901
Replicate 32.8447201238136
Condition 2: 8 Hour
Replicate 14.3611716766407
Replicate 24.5364060499966
Replicate 34.3222775906115
Condition 3: 24 Hour
Replicate 12.8773156764041
Replicate 22.3960008772222
Replicate 32.535318155107


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43140.p1 GENE.S_Transcript_43140~~S_Transcript_43140.p1 ORF type:complete len:577 (+),score=98.46,START|PF01852.15|1.9e-40 S_Transcript_43140:1351-3081(+)
ATGAGCATCTACTCGAGACACTTCCAAGATTCAATCCCTACATGTTCTGAGATGATTCCCATGCCTTTGCTTCCAGACTCGACACAATATTCTGGTAGTGGAGTTGGCCTAATCATGGACGAGGAGAGGCCCCTTGCTATGGAACTTGCCATGTCTTCTATGGACGAGTTGCTGAAGATGTGTCATGCTAACGAGCCTCTCTGGCTTCGTAATAATAGCAACTCGATGGATGTGCTTAATGTCGAAGAGTATTCAAGGATGTTCACTTGGCCTATTGATCCTCTCAAACAACATTACAATGAGTTGAGAACTGAGGCAACTAGGGACACCACACTTGTCATCATGAACAGCGTCAATTTAGTTGATGCTTTCCTTGATGCTAACAAATGGGTGGAATTGTTCCCTTCTGTTGTCTCTCGAGCTAAAACCATCCAGATTCTAGCCTCGGGGGTATCTGGTCATGCAAGTGGCTCCCTTCATCTGATGTATGCTGAGCTGCAAGTACTTTCACCATTGGTACCAACACGCGAAGCTCATTTCCTGCGATACTGTCAACAGAATGTAGAGGAAGGGACATGGGCAATTGTCGATTTCCCTATCGATAGCTTCCATGGCATTTTTCAACTCTCCCAACATGCTCCTCGTTATAGAAGACGCCCCTCAGGTTGCATCATTCAAGACATGCCTAATGGGTACTCTAAGGTTACTTGGGTTGAACATGCTGAGATACTGGATCCGAAACCAACCCACCAAGTATTTGATCAATATGTTCATAGTGGCATGGCATTTGGTGCGAAAAGATGGTTGGCTGTTCTTCAAAGGCAATGTGAGAGGGTCGCTAGCCTCATGGCTCGAAACATCTCCGATCTTGGAGCAGTGATACAGTCACCAGAAGCAAGGAAGAATTTCATGAAGTTGGCACAAAGGATGATAAGGACATTTTGTGTAAATATTAGCACTTCAGGGGGTCAATCATGGACTGCATTATCTGAATCTGCTGAGGACACTGTTAGAATTACTACTAGGAAGATCACTGAGCCAGGTCAGCCTAGTGGCTTAATTCTCGGAGCTGTTTCAACCACCTGGCTGCCTTACTCTCATGACCAGGTCTTTGATCTCTTGAAGAATGAACATCGAAGATCTCAGCTTGAAGCTCTATCAAATGGAAGTTCATTGCATGAAGTGGCTCATATTGCTAATGGTTCTCATCCAGGGAACTGCATCTCTCTTCTTCGCATCAATGTGGCAAGCAACTCCTCCCAAAATGTGGAACTAATGTTGCAGGAGAGTTGCACGGATGCATCAGGCAGCCTGATAGTATTCACTACAATGGAAGTTGACTACATCCAGCTAGTGATGAGCGGCGAGGATCCGTCCTGCATTCCTCTACTCCCAGTTGGATTCTCCATAATACCCCTCGGACCGACCAACGGAACGTCGAGTCCAGGCAGGGCCACTGTGGTGGAGGACCAAGGGCCCAACAACACCCAGGCTACAACTACAACAACAGGGTGCCTTCTGACAGTAGGGCTTCAGGTCCATGCCAGTACAATCCCAAATGCTAAGTTGAACCTCTCTAGTGTGACCGCAATTAATAACCACATCTGTAGTGTGGTCCACCAAATTAATGCTACCCTTGGCAATACCAATGGTGGCACCAGCACAAGCACTACCACTAATGCTAATAATAATGGTAATGGCAGTGCTTGCCCTGCTGCTACCAGTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43140.p1 GENE.S_Transcript_43140~~S_Transcript_43140.p1 ORF type:complete len:577 (+),score=98.46,START|PF01852.15|1.9e-40 S_Transcript_43140:1351-3081(+)
MSIYSRHFQDSIPTCSEMIPMPLLPDSTQYSGSGVGLIMDEERPLAMELAMSSMDELLKMCHANEPLWLRNNSNSMDVLNVEEYSRMFTWPIDPLKQHYNELRTEATRDTTLVIMNSVNLVDAFLDANKWVELFPSVVSRAKTIQILASGVSGHASGSLHLMYAELQVLSPLVPTREAHFLRYCQQNVEEGTWAIVDFPIDSFHGIFQLSQHAPRYRRRPSGCIIQDMPNGYSKVTWVEHAEILDPKPTHQVFDQYVHSGMAFGAKRWLAVLQRQCERVASLMARNISDLGAVIQSPEARKNFMKLAQRMIRTFCVNISTSGGQSWTALSESAEDTVRITTRKITEPGQPSGLILGAVSTTWLPYSHDQVFDLLKNEHRRSQLEALSNGSSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDASGSLIVFTTMEVDYIQLVMSGEDPSCIPLLPVGFSIIPLGPTNGTSSPGRATVVEDQGPNNTQATTTTTGCLLTVGLQVHASTIPNAKLNLSSVTAINNHICSVVHQINATLGNTNGGTSTSTTTNANNNGNGSACPAATSS*

Click here to download the sequence:
Link to NCBI Protein BLAST