Transcript Information: S_Transcript_431532.p1


Annotated TAIR IDAT5G20480.1
Annotated Gene NameEF-TU receptor
Annotated Gene Symbol(s)EFR
Annotation TypeHomolog
Chromosome Positionchr5:6922497-6925679 | Forward length=1031
E-Value1E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31089954713996
Replicate 20.30929144239507
Replicate 30.043090504868226
Condition 2: 8 Hour
Replicate 10.099651356622117
Replicate 20.31362404635131
Replicate 30.14941014676389
Condition 3: 24 Hour
Replicate 10.56143392148723
Replicate 20.21181132314343
Replicate 30.23572004116931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_431532.p1 GENE.S_Transcript_431532~~S_Transcript_431532.p1 ORF type:5prime_partial len:428 (-),score=34.78,LRR_8|PF13855.2|0.079,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|0.011,LRR_8|PF13855.2|0.0048,LRR_8|PF13855.2|3.6,LRR_8|PF13855.2|17,LRR_8|PF13855.2|0.0002,LRR_8|PF13855.2|3.7e-08,LRR_8|PF13855.2|4.6,LRR_4|PF12799.3|0.44,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|37,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|21,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|40,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|21,LRR_4|PF12799.3|0.63,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|2.1e+02,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|5.3,LRR_1|PF00560.29|6,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6.3e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|4.8e+03,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|6.1e+02,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|29,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|16,LRR_1|PF00560.29|1.3 S_Transcript_431532:220-1503(-)
AACCTTTCTTTCCTTAACACCCTTTCTCTTGGAGTGAATAGCTTTTCCGGAAGAATCCCACAAGAGATTGGCAATCTGTTGCAGCTAAAAACATTGAATCTCACCTCAAACCACCTTGAAGGAACTATACCGGCTTCCCTAGGATATTGCTCGCAACTCTTAATACTTGATCTTTCATCCAACAGTCTAGAAGGAAGGATGCCGTCAGAGCTAGGTAAGCTGTCAAAACTCAATGGTTTAATCCTCAGGGATAACTTCCTTACAGGCCCAATTCCACACTCATTCCGAAACCTTTCTTCCCTGAGAGGCATGTTGTTGTGGAGAAATAGCTTGACTGGACAAATAACAGAGTACCTAGGTAACCTTCACCTTCTAACGAGGGTCAACTTTGGTGCAAATCAATTACATGGTGAAATCCTGCCTTCGATATTCAATTTGTCTTCACTACAGGAATTGGGTCTGACACTTAATAGAATCTCAGGTACACTTCCTTCCGATATGTTTTCCAGATTAAGTAACTTGGCATTTGTCGGCATTGGTGGGAATCAGTTCTCTGGCCATATACTCATCTCTTTGGGCAATGCCTCCAATCTCATTGTAGCTGATTTTTCTAACAACACTTTCACTGGGCATATTCCTTTGCTATGGAATCTCCCAAAACTTAAACAATTAAATTTCGAAGTTAACAAGCTTGTAACTGATGGCAACCATGGATGGGATTTCCTTACTTCTCTAGCTAATTTTACACAGCTTCAGGTCTTCTCTTTGGCAGATAATCTGATTACTGGTAAACTTCCACCCACTGTTGGAAATCTTTCCCGTCAGTTCGCTGAATTTTACCTTGGGGGAAATCAGTTAGAAGGAAGTTTACCGGCAGAAGTTGGTAACTTGATTGGCCTCACCAAATTGGCAATTGAATTTAATTCATTCAGTGGCAACATTCCACCATCTATAGGAAATTTACGAGTTCTGCAGATCCTTTATTTCCTTAATAATAATTTTTCAGGGCATATACCAGAATCACTAGCGAACTTGACTGCCTTGTCAGAGATGTATTTGGGAGAAAACTCTCTAAGTGGAATCATACCGTCTGTTCTCGATAACCTGCAGCATCTTGAAGCACTAGACCTCTCACACAATATGTTAAATGGAACAATCCCTGTCGAGATCTTTAACATTCCAAACCTAGCTAAATACCTTGACCTTTCATTTAACTCCTTGAGTGGTCACATCCCTGAGCAAATTGGCAACTTCAAGATGATTCAAAAAATAGATCTAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_431532.p1 GENE.S_Transcript_431532~~S_Transcript_431532.p1 ORF type:5prime_partial len:428 (-),score=34.78,LRR_8|PF13855.2|0.079,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|0.011,LRR_8|PF13855.2|0.0048,LRR_8|PF13855.2|3.6,LRR_8|PF13855.2|17,LRR_8|PF13855.2|0.0002,LRR_8|PF13855.2|3.7e-08,LRR_8|PF13855.2|4.6,LRR_4|PF12799.3|0.44,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|37,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|21,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|40,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|21,LRR_4|PF12799.3|0.63,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|2.1e+02,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|5.3,LRR_1|PF00560.29|6,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6.3e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|4.8e+03,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|6.1e+02,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|29,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|16,LRR_1|PF00560.29|1.3 S_Transcript_431532:220-1503(-)
NLSFLNTLSLGVNSFSGRIPQEIGNLLQLKTLNLTSNHLEGTIPASLGYCSQLLILDLSSNSLEGRMPSELGKLSKLNGLILRDNFLTGPIPHSFRNLSSLRGMLLWRNSLTGQITEYLGNLHLLTRVNFGANQLHGEILPSIFNLSSLQELGLTLNRISGTLPSDMFSRLSNLAFVGIGGNQFSGHILISLGNASNLIVADFSNNTFTGHIPLLWNLPKLKQLNFEVNKLVTDGNHGWDFLTSLANFTQLQVFSLADNLITGKLPPTVGNLSRQFAEFYLGGNQLEGSLPAEVGNLIGLTKLAIEFNSFSGNIPPSIGNLRVLQILYFLNNNFSGHIPESLANLTALSEMYLGENSLSGIIPSVLDNLQHLEALDLSHNMLNGTIPVEIFNIPNLAKYLDLSFNSLSGHIPEQIGNFKMIQKIDLI*

Click here to download the sequence:
Link to NCBI Protein BLAST