Transcript Information: S_Transcript_431573.p1


Annotated TAIR IDAT5G45320.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18362354-18363053 | Reverse length=198
E-Value1E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26746734909729
Replicate 20.22173657846749
Replicate 30.27803119724021
Condition 2: 8 Hour
Replicate 10.32148829623819
Replicate 20.33726404984512
Replicate 30.21422962417067
Condition 3: 24 Hour
Replicate 10.10977328387233
Replicate 20.22777700076731
Replicate 30.2534878834685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_431573.p1 GENE.S_Transcript_431573~~S_Transcript_431573.p1 ORF type:complete len:199 (+),score=21.90 S_Transcript_431573:154-750(+)
ATGCGGCCAAACACCCGCTCCCAACGTACCCATCCCTTGATTTGGTGCCTAGCCATTATTTGCACCATCTTGACTGTCATTGTTATCATAACCGGCATTGTTGTTTTCGTAGGTTACCTAGCCATCAAACCAAGCATACCATATGTTAGTGTGACACAAGCACATTTAGACACGTTCGATGCTGATCAAGCTGGGGTGCTAACCACTAGGCTAACTATCATTTTTAAGGCCGAAAATGACAACTCCAAGGCCCATGCTAGCTTCACTGGCTTCTTTTATCACTTGGCATTTGATGGAGTTGCTATTGCAAGATTGAGGAATTGGGACTTTGATTTGCAAAAGAATGAATCCAAGTTGTTTACATTTTTGGTTAACTCGGATCCTATACCGTTGGATCCAGATCAAATGAATGTGGTAGATCGTTCTTTAAAGCAAAATAGGATTGTGTTTGATTTGTATGGCTCTACAAGGACAAGGTGGCAAGTTGGGCCCTTGGGCTCCCTCAGGCACTGGCTACGCTTGGGTTGTCAGCTCCGTTTTCAGGCTGTTGGTGGCTACATTACTCCTGATTCTCATTGTAACTCCAAGTCCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_431573.p1 GENE.S_Transcript_431573~~S_Transcript_431573.p1 ORF type:complete len:199 (+),score=21.90 S_Transcript_431573:154-750(+)
MRPNTRSQRTHPLIWCLAIICTILTVIVIITGIVVFVGYLAIKPSIPYVSVTQAHLDTFDADQAGVLTTRLTIIFKAENDNSKAHASFTGFFYHLAFDGVAIARLRNWDFDLQKNESKLFTFLVNSDPIPLDPDQMNVVDRSLKQNRIVFDLYGSTRTRWQVGPLGSLRHWLRLGCQLRFQAVGGYITPDSHCNSKSK*

Click here to download the sequence:
Link to NCBI Protein BLAST