Transcript Information: S_Transcript_431817.p1


Annotated TAIR IDAT5G45820.1
Annotated Gene NameCBL-interacting protein kinase 20
Annotated Gene Symbol(s)CIPK20, SnRK3.6, PKS18
Annotation TypeOrtholog
Chromosome Positionchr5:18587081-18588400 | Reverse length=439
E-Value4.8E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3277636191088
Replicate 22.0100589184721
Replicate 31.9202848850604
Condition 2: 8 Hour
Replicate 10.18503592466059
Replicate 20.19411582333819
Replicate 30.18495312455515
Condition 3: 24 Hour
Replicate 16.6814068810711
Replicate 25.8503114481244
Replicate 36.0729868307329


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_431817.p1 GENE.S_Transcript_431817~~S_Transcript_431817.p1 ORF type:complete len:461 (+),score=43.94,Pkinase|PF00069.21|5.9e-74,Pkinase_Tyr|PF07714.13|8.7e-41,NAF|PF03822.10|3.9e-22,Kinase-like|PF14531.2|5.6e-08 S_Transcript_431817:614-1996(+)
ATGGAGAAGAATGGGTCGATTTTAATGCAAAAATACGAGCTAGGCCGGTTGCTAGGACAAGGTACATTTGCCAAGGTCTATTATGGAAGACACATTGTGTCGGGCCAAAGCGTGGCCATCAAGATGGTCGACAAGGAGAAGGTATTGCGGGTTGGATTAATAAACCAAATCAAGCGTGAAATCTCGGTGATGAGATTAGTTAGACACCCTAACATAGTCCAACTTTATGAAGTCATGGCTAGCAAGACCAAGATATATTTTGCAATGGAATATGTTAAGGGTGGTGAGCTATTTAATAAGATCACCAAGGGAAGGCTTAAGGAAGATGAAGCACGTAAGTACTTTCAACAACTAATAAGTGCCATTGATTTTTGTCATAGCCGGGGTGTTTACCATAGAGATATTAAGCCGGAGAATTTACTCCTTGATGAGAATGGTAACCTCAAAGTCTCGGATTTTGGGCTTAGCGCTTTGTTGGATTCACGACGCCAAGATGGGCTTCTCCATACTACTTGTGGCACCCCGGCCTATGTTGCTCCCGAGGTCATTAACAAGAGAGGTTATGATGGCTCCAAAGCGGATATTTGGTCTTGTGGGGTGGTGTTGTATGTGCTATTGGCTGGGTTTCTACCATTTCATGACACAAACCTAATGGAGTTGTATAGAAAGATTAGCAAGGGGGATTTCAGATGCCCAGGCTTCTTCCCACCGGAGGTTCGAAAATTTTTAGCCCGAATCCTTGACCCAAACCCGTACACTAGGATAACCGTGTCAAAGTTGATGGAGAACTCATGGTTTCAAAAAGGATTCAAACATGTTGAGAGTAGGCCCAATGACATAGACGATCTAGGCCCGCCCACGACCCCAAGGGATGTTCGGGCCGCCTTCACAATCGACTTCGAAAGTGGGTCATCCGAGCCAACAGCCAAAGAGGATGATGAAAAGGAAACAAATCCAGGCCCAATGAAGCCCGCATGTTTGAATGCCTTTGACATAATCTCCCTCTCACCGGGCTTCGACCTATCAGGCCTATTCGAGAAGGACCCAAGACATAGGCCCGAGGCCCGGTTCACGACATGGAAGCCCCCATCAATGATAGTATCAAAGTTAGAGCAAATAGCCCAAATGGATGGATTCAAAATACGGAAGAAGGATGGGATGGTGAAGATGCAGAGCAGCAAAGTAGGGAGGAAAGGGCTACTAAGAATCGACGCCGAGATCTTCGAGGTGGCCCCCACATTACACATGGTGGAGGTCAAGAAGTCTTCCGGCGACACCATAGAGTATAATGATTTTTGTGACCATGATTTGAAGCCGGCTCTAAGGGACATAGTTTGGACATGGCAAGGAAGTGCACCACAACAGCAAGAACAGACTGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_431817.p1 GENE.S_Transcript_431817~~S_Transcript_431817.p1 ORF type:complete len:461 (+),score=43.94,Pkinase|PF00069.21|5.9e-74,Pkinase_Tyr|PF07714.13|8.7e-41,NAF|PF03822.10|3.9e-22,Kinase-like|PF14531.2|5.6e-08 S_Transcript_431817:614-1996(+)
MEKNGSILMQKYELGRLLGQGTFAKVYYGRHIVSGQSVAIKMVDKEKVLRVGLINQIKREISVMRLVRHPNIVQLYEVMASKTKIYFAMEYVKGGELFNKITKGRLKEDEARKYFQQLISAIDFCHSRGVYHRDIKPENLLLDENGNLKVSDFGLSALLDSRRQDGLLHTTCGTPAYVAPEVINKRGYDGSKADIWSCGVVLYVLLAGFLPFHDTNLMELYRKISKGDFRCPGFFPPEVRKFLARILDPNPYTRITVSKLMENSWFQKGFKHVESRPNDIDDLGPPTTPRDVRAAFTIDFESGSSEPTAKEDDEKETNPGPMKPACLNAFDIISLSPGFDLSGLFEKDPRHRPEARFTTWKPPSMIVSKLEQIAQMDGFKIRKKDGMVKMQSSKVGRKGLLRIDAEIFEVAPTLHMVEVKKSSGDTIEYNDFCDHDLKPALRDIVWTWQGSAPQQQEQTV*

Click here to download the sequence:
Link to NCBI Protein BLAST