Transcript Information: S_Transcript_432585.p1


Annotated TAIR IDAT1G05600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1672161-1673675 | Forward length=504
E-Value1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0691430924153
Replicate 24.0857017699102
Replicate 34.4887082531515
Condition 2: 8 Hour
Replicate 17.4469616980464
Replicate 26.0368480456405
Replicate 37.5564115848347
Condition 3: 24 Hour
Replicate 13.0051162473833
Replicate 23.8372591028736
Replicate 32.9358993487437


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_432585.p1 GENE.S_Transcript_432585~~S_Transcript_432585.p1 ORF type:5prime_partial len:189 (-),score=40.19,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|9.8e-06,PPR_1|PF12854.3|4.4e-09,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|0.05,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|5.4e-08,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|0.018,PPR|PF01535.16|39,PPR|PF01535.16|0.5,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.038,PPR|PF01535.16|0.004,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|65,PPR_3|PF13812.2|1.7 S_Transcript_432585:102-668(-)
AACAAAGTACTTGATGAAATGCGTGAAAGAGGTTTTAGACCGACAGTAAGGGTATATGAATCGAAGGTAGCAGCAATGTGCAGAGCTGGTAGAGTTGATGAAGCTAGCAAGGTAATAGAGGAGGATATGCTGAGGAAGGATTGTGTACCAGATTCCAAAGTCTACAGCATTGTCGTGAAAGGCTTTTGTAATGAGGGTAAGTTGGATTTAGCCATTAGGTTTCTTGAGAAGATGGATAGGCAGAAAGGTTGTGCCCCTGACAAGGAGACATTCAGCTTCATTGTTGATCGATTGTGCCAGGATGGGAAGTTTGTTGACGCTAGTAGAATACTGGAAAGGATGTTATGCAAATCGTATTGGCCTGAACCTGATACTTTCGATGCTCTTATCGGAGGTCTTTGCTCCATTAACAGAATATATGAAGCTGTTTTGTGGCTGCAAGAGATGATTAGTCAGGGTAAGGTGCCTGAGTCTTCTATATGGAGTGTCTTAGTAGCATCAGTTGGCTCTAACATGGAAGGTCCTACTACTAGTCTTCTGCTGGATCAGCTGAGGAGCACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_432585.p1 GENE.S_Transcript_432585~~S_Transcript_432585.p1 ORF type:5prime_partial len:189 (-),score=40.19,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|9.8e-06,PPR_1|PF12854.3|4.4e-09,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|0.05,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|5.4e-08,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|0.018,PPR|PF01535.16|39,PPR|PF01535.16|0.5,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.038,PPR|PF01535.16|0.004,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|65,PPR_3|PF13812.2|1.7 S_Transcript_432585:102-668(-)
NKVLDEMRERGFRPTVRVYESKVAAMCRAGRVDEASKVIEEDMLRKDCVPDSKVYSIVVKGFCNEGKLDLAIRFLEKMDRQKGCAPDKETFSFIVDRLCQDGKFVDASRILERMLCKSYWPEPDTFDALIGGLCSINRIYEAVLWLQEMISQGKVPESSIWSVLVASVGSNMEGPTTSLLLDQLRSTS*

Click here to download the sequence:
Link to NCBI Protein BLAST