Transcript Information: S_Transcript_433063.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeHomolog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value6E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57176369841208
Replicate 20.47400524439973
Replicate 30.43225162695939
Condition 2: 8 Hour
Replicate 10.4165115296315
Replicate 20.83020532061485
Replicate 31.1240779010439
Condition 3: 24 Hour
Replicate 10.21332894033783
Replicate 20.22132628492527
Replicate 30.44335624930868


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_433063.p1 GENE.S_Transcript_433063~~S_Transcript_433063.p1 ORF type:3prime_partial len:512 (+),score=67.67,Ion_trans|PF00520.27|5.2e-38 S_Transcript_433063:323-1855(+)
ATGGCATTGGATGTTATTCGAAGAGGACTCGAGAGGAGTTCAAGAGGGTTCAAAAGCTTACGAGGGTCACTTAGCTTTCAGTTACTCTATTATCAATCACCAAGAAAGCCTGGTCCTGGGAAAACTGTTGTCGACCCCCAGGGACCATTTCTTCAGAGATGGAATAAGATATTTCTACTCTTTTGTGTGCTTTCTCTAGCCTTTGATTCATTGTTCTTGTATGTTCCCTTTGTTGATCACGACAACAAGTGTGTGAAGGCTGATCACATTTTGGGAATCCTAGCTTGTGTTGTGCGCACATTGTCAGACCTGTTCTATCTACTTCATATGAATATGCAGTTTCGTACTGGCTTCATTTCTCCTTCTTCTCGAGTATTGGGCAGAGGCGTATTAGTCACTGATCGTTTTGCTATTGCGAGGAGATATATCTTTTCGTACTTCTTCATTGATGTTCTTGCTGTCCTGCCCTTGCCCCAGCTGGCTGTTCTATTAATCATGCTAAGGTTGTCAAGACATTTGAGTTCAAAAGGCTTCTTGATAACTGTGATTTTCAGCCAATTTGCCCCAAGGATAGCCAGGATTTATCCTTTATACAAGGAAGTGACACGAACTTCAGGCATAATTACTGCGACGGCATGGGGTGGAGCTGCTTTCAATCTGTTTCTCTACATGCTAGCAAGTCATCTGGTTGGAGCAGTTTGGTATGTGTTTGCAGTTGATCGGCAAGAGATATGCTGGCGAAAGTCATGCATGGATCCTGAGGGACATGGGTGCCATAATCTGTCTTTATATTGCAAATATAGTAATCAACAAAAGTATACATTCAATGCGACTTACTGCAATCTTCAAGACCCTGATGATATAAAAGATTCTTCTGTCTATAACTTTGGCATGTTCTATAATGCTCTTCAATCACAAGTTGTGCAATCCAGCCATTTTTTTGAGAAGCTGTTTTATTGCTTCTGGTGGGGCCTTCAATCTATCAGCTCGCTTGGCCAGAATCTTAAAACAAGTACTTCTATTGGAGAGAACTTGTTTGCGGCCTTCATTTGTGTGTTTGGATTGTTCTTGTTTTCATTGCTCATCGGGAATATGCAGACATATCTGCAATCAACAACTGTCAGAGTTGAGGAGATGAGAGTGAAAAAGCGCGATGCAGAGAAGTGGATGTCCCATCGTATGCTTCCTGAGGAGTTAAGGAGAAGGATTAGGAGGTACGAGCAATACAAATGGCAAGAGACAAGGGGTGTCGATGAAGAGAATGTAATCTGCAATCTTCCTAAGGATCTTAGGAGGGACATCAAACGTCATCTCTGTGTATCGCTCCTTATGAGAGTGCCAATGTTTCAGAAAATGGACGAAAAGCTTATAGATGCAATGTGTGACCGTCTCAAACCAGTGCTTTACACAGATAACAGCTCCATTTTACGAGAAGGAGATCCAGTAAATGAGATGCTGTTTATTATGAGAGGAAAACTATTGACTATGACTACAAATGGTGGAAGGACTGGCTTCTTTAACTCGGATTTTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_433063.p1 GENE.S_Transcript_433063~~S_Transcript_433063.p1 ORF type:3prime_partial len:512 (+),score=67.67,Ion_trans|PF00520.27|5.2e-38 S_Transcript_433063:323-1855(+)
MALDVIRRGLERSSRGFKSLRGSLSFQLLYYQSPRKPGPGKTVVDPQGPFLQRWNKIFLLFCVLSLAFDSLFLYVPFVDHDNKCVKADHILGILACVVRTLSDLFYLLHMNMQFRTGFISPSSRVLGRGVLVTDRFAIARRYIFSYFFIDVLAVLPLPQLAVLLIMLRLSRHLSSKGFLITVIFSQFAPRIARIYPLYKEVTRTSGIITATAWGGAAFNLFLYMLASHLVGAVWYVFAVDRQEICWRKSCMDPEGHGCHNLSLYCKYSNQQKYTFNATYCNLQDPDDIKDSSVYNFGMFYNALQSQVVQSSHFFEKLFYCFWWGLQSISSLGQNLKTSTSIGENLFAAFICVFGLFLFSLLIGNMQTYLQSTTVRVEEMRVKKRDAEKWMSHRMLPEELRRRIRRYEQYKWQETRGVDEENVICNLPKDLRRDIKRHLCVSLLMRVPMFQKMDEKLIDAMCDRLKPVLYTDNSSILREGDPVNEMLFIMRGKLLTMTTNGGRTGFFNSDFL

Click here to download the sequence:
Link to NCBI Protein BLAST