Transcript Information: S_Transcript_433064.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeHomolog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96774549946111
Replicate 20.2674277522123
Replicate 30.11177415808243
Condition 2: 8 Hour
Replicate 10.64622394900403
Replicate 20.40676088435867
Replicate 31.1626825966354
Condition 3: 24 Hour
Replicate 10.13239323327633
Replicate 20.13735643379605
Replicate 31.0700261262777


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_433064.p1 GENE.S_Transcript_433064~~S_Transcript_433064.p1 ORF type:3prime_partial len:165 (+),score=17.89 S_Transcript_433064:182-673(+)
ATGCTTACCCAACTAACGGATTCCAAGCCAGAAAAATTTGTAAGTTTTGGGGACAGATATTCGGAAGGCTCAACAAGCTCTGATCACTCACTGGATCGTACAGAGAGACTCTTCCCAGAGAAAAGACCATCATTTAATATGGCATTGGATGTTATTCGAAGAGGACTCGAGAGGAGTTCAAGAGGGTTCAAAAGCTTACGAGGGTCACTTAGCTTTCAGTTACTCTATTATCAATCACCAAGAAAGCCTGGTCCTGGGAAAACTGTTGTCGACCCCCAGGGACCATTTCTTCAGAGATGGAATAAGATATTTCTACTCTTTTGTGTGCTTTCTCTAGCCTTTGATTCATTGTTCTTGTATGTTCCCTTTGTTGATCACGACAACAAGTGTGTGAAGGCTGATCACATTTTGGGAATCCTAGCTTGTGTTGTGCGCACATTGTCAGACCTGTTCTACCTACTTCATATGATTATGCAGTTTCGTACTGGCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_433064.p1 GENE.S_Transcript_433064~~S_Transcript_433064.p1 ORF type:3prime_partial len:165 (+),score=17.89 S_Transcript_433064:182-673(+)
MLTQLTDSKPEKFVSFGDRYSEGSTSSDHSLDRTERLFPEKRPSFNMALDVIRRGLERSSRGFKSLRGSLSFQLLYYQSPRKPGPGKTVVDPQGPFLQRWNKIFLLFCVLSLAFDSLFLYVPFVDHDNKCVKADHILGILACVVRTLSDLFYLLHMIMQFRTGF

Click here to download the sequence:
Link to NCBI Protein BLAST