Transcript Information: S_Transcript_433065.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value6.1E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24267174378584
Replicate 20
Replicate 30.16817084574712
Condition 2: 8 Hour
Replicate 11.1667386799647
Replicate 20
Replicate 30.5183184827959
Condition 3: 24 Hour
Replicate 10.3319891107993
Replicate 20.20666089583295
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_433065.p1 GENE.S_Transcript_433065~~S_Transcript_433065.p1 ORF type:3prime_partial len:329 (+),score=37.34,Ion_trans|PF00520.27|6.7e-14 S_Transcript_433065:634-1617(+)
ATGACGGACTTTTCTCACTCAAAATTTGTATCAACTGGCAGCTGGTTGGAGCAGTTTGGTATGTGTTTGCAGTTGATCGGCAAGAGATATGCTGGCGAAAGTCATGCATGGATCCTGAGGGACAAGGATGCCATAATCTATCTTTATATTGCAAATATACCAATCTACAAAACTATACATTCAATGCGGCGAAAGTCATGCATGGATCCTGAGGGACAAGGATGCCATAATCTATCTTTATATTGCAAATATACCAATCTACAAAACTATACATTCAATGCGACTTACTGCAATCTTCAAGACCCTGATGATATAAAAGATTCTTCTGTCTATAACTTTGGCATGTTCTATAATGCTCTTCAATCACAAGTTGTGCAATCCAGCCATTTTTTTGAGAAGCTGTTTTATTGCTTCTGGTGGGGCCTTCAATCTATCAGCTCGCTTGGCCAGAATCTTAAAACAAGTACTTCTATTGGAGAGAACTTGTTTGCGGCCTTCATTTGTGTGTTTGGATTGTTCTTGTTTTCATTGCTCATCGGGAATATGCAGACATATCTGCAATCAACAACTGTCAGAGTTGAGGAGATGAGAGTGAAAAAGCGCGATGCAGAGAAGTGGATGTCCCATCGTATGCTTCCTGAGGAGTTAAGGAGAAGGATTAGGAGGTACGAGCAATACAAATGGCAAGAGACAAGGGGTGTCGATGAAGAGAATGTAATCTGCAATCTTCCTAAGGATCTTAGGAGGGACATCAAACGTCATCTCTGTGTATCGCTCCTTATGAGAGTGCCAATGTTTCAGAAAATGGACGAAAAGCTTATAGATGCAATGTGTGACCGTCTCAAACCAGTGCTTTACACAGATAACAGCTCCATTTTACGAGAAGGAGATCCAGTAAATGAGATGCTGTTTATTATGAGAGGAAAACTATTGACTATGACTACAAATGGTGGAAGGACTGGCTTCTTTAACTCGGATTTTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_433065.p1 GENE.S_Transcript_433065~~S_Transcript_433065.p1 ORF type:3prime_partial len:329 (+),score=37.34,Ion_trans|PF00520.27|6.7e-14 S_Transcript_433065:634-1617(+)
MTDFSHSKFVSTGSWLEQFGMCLQLIGKRYAGESHAWILRDKDAIIYLYIANIPIYKTIHSMRRKSCMDPEGQGCHNLSLYCKYTNLQNYTFNATYCNLQDPDDIKDSSVYNFGMFYNALQSQVVQSSHFFEKLFYCFWWGLQSISSLGQNLKTSTSIGENLFAAFICVFGLFLFSLLIGNMQTYLQSTTVRVEEMRVKKRDAEKWMSHRMLPEELRRRIRRYEQYKWQETRGVDEENVICNLPKDLRRDIKRHLCVSLLMRVPMFQKMDEKLIDAMCDRLKPVLYTDNSSILREGDPVNEMLFIMRGKLLTMTTNGGRTGFFNSDFL

Click here to download the sequence:
Link to NCBI Protein BLAST