Transcript Information: S_Transcript_43313.p1


Annotated TAIR IDAT1G26580.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9185620-9187213 | Forward length=493
E-Value1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.744130373511
Replicate 211.465701659811
Replicate 311.980517534622
Condition 2: 8 Hour
Replicate 113.517274964797
Replicate 212.947487204881
Replicate 312.336336999733
Condition 3: 24 Hour
Replicate 114.276577399365
Replicate 29.9934917187044
Replicate 311.320130166076


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43313.p1 GENE.S_Transcript_43313~~S_Transcript_43313.p1 ORF type:3prime_partial len:254 (+),score=53.77 S_Transcript_43313:360-1118(+)
ATGGCACAGAAGCGACCATTTGATGATGAAGTAGCCAACGAGGCTTCTACGAAGCATCCAAGACAAGATGGGCCTAGTGATGATATTGTTTCACGTAATGACTATTTATGTATAGAAGGTGTCTCTGATAAAGCTTATGATCCAGGTGAGCCTAGCTTTGGCAAAAGCGAAATTGGATTTCGGGAAAATGAAAACGGCATTTGTCCTGTGCCTCCCAGGGAGGCTTTCAAGGACATTGAATCTGAGGTTGCCAGATCGGCTTCTCTATCGCACTGGGCTACCATTAGTACTAGTGATGAAGATGAGCCTCCAGGGCAACTGGTTCATCTACCCTTCTTCCCTGGATATTTTGGTTTTGACCATCCTGTGAGGCCAGCAATAAACGCTGACGATGTTTATTATTGTTTGTTGGATTATCCTCCTCGGAAGCGAGTCCCTGTTGGGCCTGAGCATCAAGCAGAAATTCCCCAATTGAGTATCCAGGGTACCTCAGATGGTATAGGAAAAACTGAATCTGCAGATTCAGGCCAAGGTTCACTTGCAAATGATGACAGACAACTAGAGGGCGTCTGTATCATGCCAATTCCGTTGACTGAGCTACCAGCATACAATGGTGAGAAAGTTGGAGATGGTAGGACTGACTGTAGCTGCCCAGATCAGGGATCTATTAGATGTGTACGAAAACACATTGTAGATGCTAGAGATAAACTCAGGAAGACCCTTGGCCAGGATACTTTCATGGAGCTGGGCTTTCATGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43313.p1 GENE.S_Transcript_43313~~S_Transcript_43313.p1 ORF type:3prime_partial len:254 (+),score=53.77 S_Transcript_43313:360-1118(+)
MAQKRPFDDEVANEASTKHPRQDGPSDDIVSRNDYLCIEGVSDKAYDPGEPSFGKSEIGFRENENGICPVPPREAFKDIESEVARSASLSHWATISTSDEDEPPGQLVHLPFFPGYFGFDHPVRPAINADDVYYCLLDYPPRKRVPVGPEHQAEIPQLSIQGTSDGIGKTESADSGQGSLANDDRQLEGVCIMPIPLTELPAYNGEKVGDGRTDCSCPDQGSIRCVRKHIVDARDKLRKTLGQDTFMELGFHD

Click here to download the sequence:
Link to NCBI Protein BLAST