Transcript Information: S_Transcript_43342.p1


Annotated TAIR IDAT2G27790.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11847335-11849285 | Reverse length=240
E-Value1.2E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1373077450932
Replicate 22.0742793601082
Replicate 30.94578133762054
Condition 2: 8 Hour
Replicate 11.093609759853
Replicate 20.7648495261445
Replicate 30.54656019499952
Condition 3: 24 Hour
Replicate 13.9208765239528
Replicate 21.9370779125083
Replicate 31.2934381746213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43342.p1 GENE.S_Transcript_43342~~S_Transcript_43342.p1 ORF type:complete len:117 (+),score=18.36,RRM_5|PF13893.2|2.3e-10 S_Transcript_43342:43-393(+)
ATGCCAAGATACAGTGATGAACCTCCTGCTGTTCGTGTATACACTGTGTGTGATGAATCCAAGTATTTAATTGTGAGGAATGTGCCAGCACTAGGATGTGGTGATGAGCTCAAACAGTTGTTTTCAACCTATGGAGAAGTTGAGGAGTGTAAACCCATGGATGGCGAGGAATGCGACCCATTTACTGATATCTATTGGATCAAATTTTACCGGATCAGCAATGCCAGGTTCACAAAAAGAAAATTAGATGAGTATGTTTTCCTTGGGAATCGGCTGCAGGCGTCATATGCTCCAGAGTACGAAAGTTTGTCTGACACGAGAAATTGGATGCTAGAAGAAAGGAAGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43342.p1 GENE.S_Transcript_43342~~S_Transcript_43342.p1 ORF type:complete len:117 (+),score=18.36,RRM_5|PF13893.2|2.3e-10 S_Transcript_43342:43-393(+)
MPRYSDEPPAVRVYTVCDESKYLIVRNVPALGCGDELKQLFSTYGEVEECKPMDGEECDPFTDIYWIKFYRISNARFTKRKLDEYVFLGNRLQASYAPEYESLSDTRNWMLEERKF*

Click here to download the sequence:
Link to NCBI Protein BLAST