Transcript Information: S_Transcript_43346.p1


Annotated TAIR IDAT5G27300.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9620810-9624990 | Forward length=575
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6334090205856
Replicate 24.992310045861
Replicate 35.6539774854834
Condition 2: 8 Hour
Replicate 16.537710900143
Replicate 26.0420321143787
Replicate 38.7130471961968
Condition 3: 24 Hour
Replicate 15.8997130595035
Replicate 24.3011613210586
Replicate 36.2594854728025


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43346.p1 GENE.S_Transcript_43346~~S_Transcript_43346.p1 ORF type:5prime_partial len:137 (+),score=24.90 S_Transcript_43346:3-413(+)
TCATATGCTCCAGAGTACGAAAGTTTGTCTGACACAAAAGAGAAATTGGATGCTAGAAGAAAGGAAGTTCTAGCAAGATTGAACCCTGGAAGATCCAGAGGTTATGAAATGCGAAACAAAGGTTCTAGGAATAATCTTATATCTGATGTAGCCCCATCTCAGGTCGTTTCTCAGCAATTAGATGTAAAGCGAGGAGGAGGTTATGCTGAAGAGACAGATCATATTTCTCAAGTTAGCCACTCTTCGATTACCAGAGTATCATCTGACCAGGATTACTTCCCATCACAATCAATGAACGAAACGGTTAAAATGGTGAGAGAGAAGCTGAATAAGATAGAATCTAGTTCTTCAAATGCACAAGTTGGACCTGCTTCAAAGAAAATGCGAGTAGACAATAGGAGAAGAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43346.p1 GENE.S_Transcript_43346~~S_Transcript_43346.p1 ORF type:5prime_partial len:137 (+),score=24.90 S_Transcript_43346:3-413(+)
SYAPEYESLSDTKEKLDARRKEVLARLNPGRSRGYEMRNKGSRNNLISDVAPSQVVSQQLDVKRGGGYAEETDHISQVSHSSITRVSSDQDYFPSQSMNETVKMVREKLNKIESSSSNAQVGPASKKMRVDNRRRI*

Click here to download the sequence:
Link to NCBI Protein BLAST