Transcript Information: S_Transcript_433766.p1


Annotated TAIR IDAT4G25270.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12937253-12938836 | Reverse length=527
E-Value7.5E-183
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0030025591148
Replicate 20.72064388001933
Replicate 30.78775505884726
Condition 2: 8 Hour
Replicate 11.5002787157782
Replicate 21.2928455244063
Replicate 31.8745092114933
Condition 3: 24 Hour
Replicate 10.60375306129783
Replicate 20.51249825172645
Replicate 30.50697576693701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_433766.p1 GENE.S_Transcript_433766~~S_Transcript_433766.p1 ORF type:5prime_partial len:398 (+),score=79.47,PPR|PF01535.16|0.0034,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|8.5e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|3.4,PPR|PF01535.16|89,PPR|PF01535.16|0.17,PPR|PF01535.16|0.19,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|2.2,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|9.2e-09,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|2.1e-05,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|39,PPR_2|PF13041.2|54,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|74,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|57,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|1.8e+02,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|13,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.38,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|70,PPR_1|PF12854.3|0.98,PPR_1|PF12854.3|8.1e+02,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|4.5e+02,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|2.9e+03,TPR_14|PF13428.2|5.8e+03,TPR_14|PF13428.2|1.4e+04,TPR_14|PF13428.2|2.7e+03,TPR_14|PF13428.2|8.5e+02,TPR_14|PF13428.2|1.6e+03 S_Transcript_433766:1-1194(+)
GTTGTGTCCAAATTGCTCAGATTGTATGCTGCAAATGGGTTTGTTGATGACGCACACCAACTGTTTGATGAAATGCCTGAGAGAGCTGAATCAGCTTTTCCTTGGAATTCTCTTATTTCAGGGTATGTTGGGCTGGGAATGTATGAGGATGCACTTGCCCTCTACTTTCAGATGGAAGAAGAGGGTGTTGAGCCTGATAGACATACCTTTCCTCGTGCTTTGAGGGCTTGTAGTGGTATTGGTTCGATTCGTGTTGGGGAAGAAATCCATCGTAAGGTTGTCCGTTATGGATTTTTCGATGATGGGTTTGTTCTTAATGCTCTTGTTGATATGTATTCTAAATGTGGTGACATTGTCAAAGCAAGAAAGGTTTTTGATCGAATCACTTCTAAGGACTTGGTTTCATGGAATACAATGATAATGGGGTATATTCATCATGGACTCTTAGGCAATGGGATTGAGATTTTTCGCCAAATGCTTAAAGATGGATTTCACCCTGATGAAATTACTATATCAACAATTGTTAAAGGAGTTTCGTCGTTAAAACTTGGAGTTCAATTACATGGATGGGTTCTTCGTCGTGGATTGGAATGGAACTTAACTATAGCAAACTCTTTCATAGCATTTTACTCTTTACATGGCCGTTTGGATCAAGCACGTTGGTTATTCTCCAACATACCTGGAAAGGATATCGTCTCATGGAATTCGATCATTGCTGCTCATCGAAAAGACCCTCGAGCACTAACATACTTCAAGCAAATGGAGGATGTTGGTGCAACTCCAGATGCCATCACATTCGTGTCACTGCTATCAGCTTGTGCACATCTTGTATTGGTGAGTGAAGGGGAGTCTTTGTTCTCGCTAATGAGAGATGAGTATCATATTAAACCCGTTATGGAGCATTATGCTTGTATGGTGAATTTGTATGGAAGAGCAGGGTTGATTACTGAGGCTTTTGAGATTCTAGTGAGTAAAATGGAGTTTGAGGCTGGCCCAACCGTGTGGGGAGCATTGTTATATGCTTGTGTTCTTAATGGAAATGCAGAAATAGGCAAGATTGCTGCTCATGAGCTTTTCGAGTTGGAGCCCGACAATGAGCACAACTTCGAACTGCTGATGAGACTATATCACAGTTTGGGCAGATTGGATGATGTAGAAAGAGTTAGAAATATGATGCTAGACCGAGGTCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_433766.p1 GENE.S_Transcript_433766~~S_Transcript_433766.p1 ORF type:5prime_partial len:398 (+),score=79.47,PPR|PF01535.16|0.0034,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|8.5e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|2.8e-07,PPR|PF01535.16|3.4,PPR|PF01535.16|89,PPR|PF01535.16|0.17,PPR|PF01535.16|0.19,PPR|PF01535.16|5.2e+02,PPR|PF01535.16|2.2,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|9.2e-09,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|2.1e-05,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|39,PPR_2|PF13041.2|54,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|74,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|57,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|1.8e+02,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|13,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.38,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|70,PPR_1|PF12854.3|0.98,PPR_1|PF12854.3|8.1e+02,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|4.5e+02,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|2.9e+03,TPR_14|PF13428.2|5.8e+03,TPR_14|PF13428.2|1.4e+04,TPR_14|PF13428.2|2.7e+03,TPR_14|PF13428.2|8.5e+02,TPR_14|PF13428.2|1.6e+03 S_Transcript_433766:1-1194(+)
VVSKLLRLYAANGFVDDAHQLFDEMPERAESAFPWNSLISGYVGLGMYEDALALYFQMEEEGVEPDRHTFPRALRACSGIGSIRVGEEIHRKVVRYGFFDDGFVLNALVDMYSKCGDIVKARKVFDRITSKDLVSWNTMIMGYIHHGLLGNGIEIFRQMLKDGFHPDEITISTIVKGVSSLKLGVQLHGWVLRRGLEWNLTIANSFIAFYSLHGRLDQARWLFSNIPGKDIVSWNSIIAAHRKDPRALTYFKQMEDVGATPDAITFVSLLSACAHLVLVSEGESLFSLMRDEYHIKPVMEHYACMVNLYGRAGLITEAFEILVSKMEFEAGPTVWGALLYACVLNGNAEIGKIAAHELFELEPDNEHNFELLMRLYHSLGRLDDVERVRNMMLDRGL*

Click here to download the sequence:
Link to NCBI Protein BLAST