Transcript Information: S_Transcript_43391.p1


Annotated TAIR IDAT3G13300.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)VCS
Annotation TypeOrtholog
Chromosome Positionchr3:4304085-4309949 | Forward length=1344
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.580848768377
Replicate 232.535735150847
Replicate 335.045257855118
Condition 2: 8 Hour
Replicate 145.623505623448
Replicate 248.387534695461
Replicate 344.555282337925
Condition 3: 24 Hour
Replicate 137.455240438385
Replicate 231.360197089502
Replicate 333.419671456816


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43391.p1 GENE.S_Transcript_43391~~S_Transcript_43391.p1 ORF type:complete len:1363 (+),score=295.94,Ge1_WD40|PF16529.1|5.7e-17,WD40|PF00400.28|0.33,WD40|PF00400.28|0.37,WD40|PF00400.28|6.1e+02 S_Transcript_43391:593-4681(+)
ATGCAGCACCAGCACTATCCCCATCACCATCACCATCACCATCAGCTTCTTACCCTCCTCCTACGGGACCTTACTCTTATCCTCCTCAAACCACTGTTTATTACCCCCATAATCACAATCATATGCCTCCCACTCCTTTCACACAACCTCAAGACCACCACCACCACCCTAACTTCAATCATACCCAAAGATCAGTATCATTTCCTACACCCCCTCTTCAACCTCCTCACCCAAACCCTAACCCTAACCCCGGTGCTCGTCTCATGGCTTTGCTTAGTAGCCCCCCTCCCAATTTTGATTACTCCCACCAACAACAGCAACATCAGCCTGTCACTCCTTTACCCCCGCCGCCTTCTTCATCCGTGTCCGTCCCTGTGCCCCTCAGTGCCCCCCCTGTTCATGGTGCTATTCATTCCGCCATGTCTCAGCCTGCCCCCATGCGTTTGCCTAGCAGTAAGCTCCCACGTGGTCGCCATTTGGTTGGTGATCATGTTGTTTATGATGTTGATGTTAGGCAGTTATCCAATGTTAAAAGCCGGCGATCCCCATCTCCATCCCCCTCTACTTCCGACAGAGAAGCAATTCGTTCAATTCGTCTTAAAAAGAGGTGAAGAACAGCCTCAGCTTGAGGTTACCCCTATCACTAAGTATGTCTCCGATCCTGGCCTCATCCTCGGCCATCAGATTGCTGTTAACAAGACTTACATTTGTTATGGCCTTAAGCTGGGTGCCATTCGTGTCCTTAATATTAACACCGCACTCAGGTCTCTACTCCGTGGACACACTCAGAGGGTCACAGATATGGCCTTTTTTGCAGAAGATGTTCATCTATTGGCTAGTGCAAGTATTGATGGACGGGTATATGTATGGAAAATATCTGAAGGTCCAGATGAGGAAGAAAAGCCACAAATTTCTGGAGTTGTCGTGCTTGCTATTCATATTACTGGGGATGAAGGATCTATTCATCCACGGGTTTGTTGGCACTGTCACAAACAAGAGATATTGGTTGTAGCCATTGGTAAAAGTGTCCTGAGGATTGATACCACTAAAGTAGGCAGAGGTGTTGAGTTCGTTGCAGAGGAGCCTCTTGAGTGTCCTATGGACAAGCTGATTGATGGGATCCAACTTGTTGGTAAACATGAAGGGGAGGTCACTGATTTATCAATGTGCCAATGGATGACCACTCGTTTAGTTTCAGCTTCCAAGGATGGAATGATTAAGATCTGGGAAGATCGCAAGGCTCTCCCGCTTCTAGTACTGAGGCCCCATGATGGCCAGCCTGTTGATGCGGCTAAGTTTTTGGCTGCTCCTCATCGTCCTGATCACATCATGCTCATCACAGCGGGACCACTTAATCGAGAGGTAAAGCTTTGGGCTTCATCAGATGAAGAAGGATGGTTGCTGCCCAGTGATGCTGAATCATGGCGGTGTATACAGACATTGGAACTGAAGAGTTCCGCTGAGCCGCGGAATGAGGAAACGTTCTTTAATCAAGTCGTGGCATTGTCTCAAGCAGGGCTTTTGTTACTCGCAAATGCTAAAAAGAATGCAATTTATGCAATACACTTAGAATATGGTCCCAACCCAGCTGCTACCCGCATGGATTACCTAGCAGAGTTCACTGTTACCATGCCTATCTTGAGCTTTACTGGGACAAGTGATGTCTTATTTCATGGAGAACACCTAGTACAGGTATATTGTGTGCAGACACAAGCCATACAGCAGTATGCATTGGACCTCTCACAGTGTCTGCCGCCACCAATGGAGAATATGGGTTTGGAGAAGTCAGAGTCCACTGTGTCTCGTGAAGCAGTGGAATGTATTCCTGCCTTAGAATCATCAGGAAGCAAATCTTTTGAGGTTCCTTTTTCTGCACCCAAACCAAGTAGTTCGCCTGACATTAAGTGTCCTGTGACCGCTGCTTCCGATGCAGCCATTACGCAGGAGATGAACACCTCCAATATGGATTCCAACACTGCTTCGTTGCTATCAACATCAAGCCATGCGGATGTTGTCTCTGTTGCATCTCCACCTCTTCCCCTTAGTCCAAGGTTATCTAGAAAGCTTAGTGATATTCGTGGCGAACAGGCTGTTACTGATTATCCAGTGGACAGGCAGATGGATAGTGCGCAGGCAAGTTCTGGTGCTCTGCCCTCTCCGAATGATGAGAACAGAACTATACAAGGGACTGCTTCTGATGTAGCTCCACCTGTCATGTTCAAACATCCAACCCATCTGATTACCCCCTCTGAGATCATGGCTACATCGTCAGGCGATACTACTCGTGCTGCTGAGAAGGGCGAGACTGAGGCTAAGATTCAAGATGTAGTTGTCAGCAATGATGGGGGAAATGTCGAAGTTGAGGTTAAAGTTGTAGGTGAAACAAGATTTGCTAATAATGATGAGGCCACCTCTCAGGTAGATCCTCAAATTGTGAGAGAAAGGAAGGAAAAGTTTTACTCCCAAGCATCTGATCTTGGGGCTGATATGAGCCGAGAGTGCTGTGCTTTACCATCTCAAACCTCTGGCATGGAAGAAGCTAGAAATAGCATAATGGAGGCTCTAGTACAACCTTCGAATTCTGGTGAGGAGGAAGAGGAAGAAGCCAGCAATGATATGTCTGGGAAAGTCACTGACTTTGCTGTGTCAGCTGCAGTTCCACAGTCTCCAGTGCCAGCTGGCAAAGGAAAAAAGCAGAAAGGGAAGATTGCTCAAGCATCTGGTTCATCATCTCCTTCCCGGAGTGTCTCTAACTCAGCAGAACTGTTGCAAGGGACTGTTACAGGTTCGAGCGCACCATCTGTGGACTTCCCACAAATTCAGGAAATGTTTAATCAGCTATTAGCTTCTCAGAAAGAAATGCAGAAGCAGGTGAGCATGATGGTTGCTGTACCAGTTACTAAAGAAGGTAGAAGACTAGAGGCAGCTCTTGGACGAAACATGGAAAAGGCTGTAAAGGCAAACACAGATGCTCTATGGGCACGTATACAAGAGGAGAATGCTAAACATGAAAAGCTGTTACGAGAGCGTACTCAACAAATAACAGGGTTGATAAATAACTTTGCCAACAAAGACTTGCTTGGCGTGCTGGAGAGAACAGTCAAAAAAGAATTGGCTTCAGTTGGTACAAGCATAGCTCGAACAGTAACTCCAGTTATTGAGAAAACTATTTCTTCATCTATATCTGAATCCTTTCAGAGAGGAGTTGGTGACAAGACAGTGAGTCAACTTGAAAAGTCTATTGCTTCAAAAGTGGAAGCTACAGTTGCCAGGCAAATCCAAGCTCAGTTCCAGACCTCTGGAAAACAAGCACTTCAGGATGGATTGAAGTCTACTTTAGAGGCCTCTATAATTCCTGCTTTCGAAATGTCATGCAAAGCAATGTTTGAGCAAGTTGATGCTGCATTTCAAAAGGGAATGGCAGAACATACAGCAGCAGCGCAGCATCAGATTGAATCAACTCATTCTCACCTAGCACTTGCCTTGAGGGATGCTCTCAATTCAGCATCTTCACTCACCCAATCTTTGAGTGGAGAACTGGCTGATGGTCAAAGGAAGTTGTTAGCTCTTGCAGCTGCTGGAGCAAATCCAAAGCAAGGAAATTCCTTGGTGACTCAACTGAGCAATGGACCTTTGGGTGGCCTGCATGACAAGGTTGAGCAGCCATTTGATCCAACAAAAGAGCTATCAAGGCTAATATCTGAGCACAAGTATGAAGAAGCATTTACTGCAGCATTGCAAAGAAGTGATGTATTCATTGTCTCCTGGCTATGTGCACAGGTTGACCTGCAACGGATTTTGTCGACAATCCCTCTCCCGTTGAGTCAGGGTGTATTGCTCTCTCTTCTGCAGCAGCTTGCTTGTGATATAACGAAGGATACAAGCAGAAAGTTGGGATGGATGACGGATGTTGCTGCATGCATAGTTCCACATGATCCAATGATTGCTGTGCATGTCCGCCCGATTTTGGAGCAGGTTTACCAAATATTAAACCATCAACGAAGCCTCCCAACCACTACAGCTGCAGAATTGTCGAGCATTCGGGTTGTGGTGCATATTATCAACTCTATGTTGATGACATCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43391.p1 GENE.S_Transcript_43391~~S_Transcript_43391.p1 ORF type:complete len:1363 (+),score=295.94,Ge1_WD40|PF16529.1|5.7e-17,WD40|PF00400.28|0.33,WD40|PF00400.28|0.37,WD40|PF00400.28|6.1e+02 S_Transcript_43391:593-4681(+)
MQHQHYPHHHHHHHQLLTLLLRDLTLILLKPLFITPIITIICLPLLSHNLKTTTTTLTSIIPKDQYHFLHPLFNLLTQTLTLTPVLVSWLCLVAPLPILITPTNNSNISLSLLYPRRLLHPCPSLCPSVPPLFMVLFIPPCLSLPPCVCLAVSSHVVAIWLVIMLFMMLMLGSYPMLKAGDPHLHPPLLPTEKQFVQFVLKRGEEQPQLEVTPITKYVSDPGLILGHQIAVNKTYICYGLKLGAIRVLNINTALRSLLRGHTQRVTDMAFFAEDVHLLASASIDGRVYVWKISEGPDEEEKPQISGVVVLAIHITGDEGSIHPRVCWHCHKQEILVVAIGKSVLRIDTTKVGRGVEFVAEEPLECPMDKLIDGIQLVGKHEGEVTDLSMCQWMTTRLVSASKDGMIKIWEDRKALPLLVLRPHDGQPVDAAKFLAAPHRPDHIMLITAGPLNREVKLWASSDEEGWLLPSDAESWRCIQTLELKSSAEPRNEETFFNQVVALSQAGLLLLANAKKNAIYAIHLEYGPNPAATRMDYLAEFTVTMPILSFTGTSDVLFHGEHLVQVYCVQTQAIQQYALDLSQCLPPPMENMGLEKSESTVSREAVECIPALESSGSKSFEVPFSAPKPSSSPDIKCPVTAASDAAITQEMNTSNMDSNTASLLSTSSHADVVSVASPPLPLSPRLSRKLSDIRGEQAVTDYPVDRQMDSAQASSGALPSPNDENRTIQGTASDVAPPVMFKHPTHLITPSEIMATSSGDTTRAAEKGETEAKIQDVVVSNDGGNVEVEVKVVGETRFANNDEATSQVDPQIVRERKEKFYSQASDLGADMSRECCALPSQTSGMEEARNSIMEALVQPSNSGEEEEEEASNDMSGKVTDFAVSAAVPQSPVPAGKGKKQKGKIAQASGSSSPSRSVSNSAELLQGTVTGSSAPSVDFPQIQEMFNQLLASQKEMQKQVSMMVAVPVTKEGRRLEAALGRNMEKAVKANTDALWARIQEENAKHEKLLRERTQQITGLINNFANKDLLGVLERTVKKELASVGTSIARTVTPVIEKTISSSISESFQRGVGDKTVSQLEKSIASKVEATVARQIQAQFQTSGKQALQDGLKSTLEASIIPAFEMSCKAMFEQVDAAFQKGMAEHTAAAQHQIESTHSHLALALRDALNSASSLTQSLSGELADGQRKLLALAAAGANPKQGNSLVTQLSNGPLGGLHDKVEQPFDPTKELSRLISEHKYEEAFTAALQRSDVFIVSWLCAQVDLQRILSTIPLPLSQGVLLSLLQQLACDITKDTSRKLGWMTDVAACIVPHDPMIAVHVRPILEQVYQILNHQRSLPTTTAAELSSIRVVVHIINSMLMTSK*

Click here to download the sequence:
Link to NCBI Protein BLAST