Transcript Information: S_Transcript_43418.p1


Annotated TAIR IDAT2G20020.1
Annotated Gene NameRNA-binding CRS1 / YhbY (CRM) domain-containing protein
Annotated Gene Symbol(s)CAF1, ATCAF1
Annotation TypeOrtholog
Chromosome Positionchr2:8644464-8647090 | Forward length=701
E-Value4.7E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.691544477006
Replicate 221.431604420629
Replicate 325.829423617734
Condition 2: 8 Hour
Replicate 129.506131726176
Replicate 231.855883303642
Replicate 332.846917310667
Condition 3: 24 Hour
Replicate 122.924344573354
Replicate 221.543883305995
Replicate 320.827045770154


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43418.p1 GENE.S_Transcript_43418~~S_Transcript_43418.p1 ORF type:complete len:769 (+),score=137.91,CRS1_YhbY|PF01985.17|5.3e-22,CRS1_YhbY|PF01985.17|5.5e-14 S_Transcript_43418:52-2358(+)
ATGGCTTTCAAAACCGTTATCCACTTCCCAATCTTCGCCCCAAACCCCATCACTCCCACAACAACCACCACACCTTCAACCACCGAAATCCGCTTTTCCCGATGGAACAACGCAAACGCCGACAAATTCAATCACCACCGCCGTACTCAACAACAAATCGAAGACGACCTCCGCCGTCACCGCCGCTTCCAATCCGCCCTCAACATCACCACTACCACCACCACTACCAACACCCCTTCTTCCCCCTCAACCACCTTCAAATCCACCGGTACCCCTTCTTCCCCTTCTCTCTCCTCCATCCCCTCCAAAAAATCCAAATACTCCAAACCCCACCAAAATCCAAGTCACCCCGCCTTTCAAAAGCTCCCCAAACTCTCCAAAGTCCCCGACAGGCAACAAGTCAAAGAAGTCAACGTCAAAGTCGACGAGGAGGGTTTATCCTACGTTGTCCCGGGGGCTCCATTCGAGTTCATGTACAGCTACACGGAGACCCCAAAAGTGAAGCCCATTGGGCTTCGGGAGCCCCCCGTTGCGCCCTTTGGGCCGGAGACTATGCCCCGGCCTTGGACCGGCCGGAAACCTTTGCCACCTAGTAAGAAGAAGTTGCCTGAGTTTGATTCTTTTAATCCTCCTCCGGCGAATAAGAAGGGGGTTAAGCCGGTCCAACGGCCTGGGCCGTTTTTGGAAGGGTCCGGGCCGAGGTATGTGGTTTCAAGGGAGGAGTTGTTGGGGGAGCCCTTGACGGAGGACGAGGTTAAGGAGCTTGTTGAGGGCTGTCGGAAGACTAAGAGGCAGCTGAACATGGGTAGAGATGGTTTGACACATAACATGTTGGATAACATCCATGCTCATTGGAAGCGGCGAAGGGTATGCAAGATCAAATGCAAAGGGGTCTGTACAGTTGACATGGATAATGTGTGCCACCAATTAGAGGAAAAGACTGGAGGGAAAATTATACACCGTAGAGGAGGCATTGTATACCTTTTCCGTGGTCGGAACTACAATTACAAGACTCGGCCTCGCTTTCCTCTTATGCTGTGGAAACCTGTCACACCTGTATACCCAAGATTAGTCAAACGAGTTCCAGAAGGCCTCACACTGGAGGAAGCAACTGATATGCGAAAGAGGGGATGTGACTTAACACCAATATGCAAGCTTGGAAAAAACGGTGTGTATGTTAACTTAGTGAAGGATGTCAGAGAGGCATTTGAAGCATGTGAGCTGGTACGGATAAACTGTCAAGGACTGAACCCAAGTGACTACCGTAAAATCGGGGCAAAGCTCAAGGATCTGGTCCCATGTGTGCTGATCTCATTTGAACATGAACACTTACTTATGTGGAGAGGAAGAGATTGGAAGTCATCTCTTGTACTACCTGAAGATGGTAGCATGGGTGAAAAGACTTCTGAAACTGACTCTGCTTCTTTTCTTACCTCAAGTGACCCCAGTTCCTTGTCTTCAGAGAATGAAGAAAGGTCTGCATTGTGTTCGTCAAGGGTGTCACGTCAAGGAACTAGTGTTGAAATGCCCAATTTCAGCACAGATTTGACTGAAAATTCAGATCAGGATGTTAATGAAGATGAGGAAATATCCTCTCAGAAGGATGACATGCTGTATGAGGTCGATGGTCTGATTTCTTCTCAGGCAAGTACCCTAGGAAGTGAAACAATGTCAGAATTTGGCAATTCTTTTGATCTTGTCGGATCTAGAATTCATACCAGAAAAACGGAAACCATAACAGTTGACAGTTTCTCTGGTAAGGAGGAGCCAACGTATGCATCTTTGCAGTCTGATTCTGTGTTAGATGTGGATGATGTTGATGACAACAAATCCGCACCAGGAAACTACTCGGATGTTTCTGCAGTTCATGACACTTTGGAAACCATGTCAGAGAACTCACAAGAAATCAGTCCTCCATCAGCTTCGCCGAGTACGGAGGGTGTTCTATTTCTTCTGAGACAAGCTGTGGAAAATGGAAGTGCTGTAATACTTGACAGGAGTTGTTTAGATGCAGATATGGTTTATCAAAGATCAGTTGTCTTTGCCCAGGTAGCTCCACCCGGACCTGTTTTTAGATACCGTCCTCGGAAAATTGCCATTCAAAAATCTGAAAAGAAAGAAAACGGGGACTTAGTGGTGGACAAGGCAATGCCAGTGCCTGAGAAGAAATCAAATGAGAAGAAGTCAACGGAAAAGAAGAGCTCTAGGACTCAAAGCCACAGGGCAAAAGATATTAAAGAAGATCATCTAAATGTAGTGCCTCAGGGAAGTCTGAAAGTAGATGAACTTGCTAAGTTGTTGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43418.p1 GENE.S_Transcript_43418~~S_Transcript_43418.p1 ORF type:complete len:769 (+),score=137.91,CRS1_YhbY|PF01985.17|5.3e-22,CRS1_YhbY|PF01985.17|5.5e-14 S_Transcript_43418:52-2358(+)
MAFKTVIHFPIFAPNPITPTTTTTPSTTEIRFSRWNNANADKFNHHRRTQQQIEDDLRRHRRFQSALNITTTTTTTNTPSSPSTTFKSTGTPSSPSLSSIPSKKSKYSKPHQNPSHPAFQKLPKLSKVPDRQQVKEVNVKVDEEGLSYVVPGAPFEFMYSYTETPKVKPIGLREPPVAPFGPETMPRPWTGRKPLPPSKKKLPEFDSFNPPPANKKGVKPVQRPGPFLEGSGPRYVVSREELLGEPLTEDEVKELVEGCRKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCHQLEEKTGGKIIHRRGGIVYLFRGRNYNYKTRPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEATDMRKRGCDLTPICKLGKNGVYVNLVKDVREAFEACELVRINCQGLNPSDYRKIGAKLKDLVPCVLISFEHEHLLMWRGRDWKSSLVLPEDGSMGEKTSETDSASFLTSSDPSSLSSENEERSALCSSRVSRQGTSVEMPNFSTDLTENSDQDVNEDEEISSQKDDMLYEVDGLISSQASTLGSETMSEFGNSFDLVGSRIHTRKTETITVDSFSGKEEPTYASLQSDSVLDVDDVDDNKSAPGNYSDVSAVHDTLETMSENSQEISPPSASPSTEGVLFLLRQAVENGSAVILDRSCLDADMVYQRSVVFAQVAPPGPVFRYRPRKIAIQKSEKKENGDLVVDKAMPVPEKKSNEKKSTEKKSSRTQSHRAKDIKEDHLNVVPQGSLKVDELAKLLA*

Click here to download the sequence:
Link to NCBI Protein BLAST