Transcript Information: S_Transcript_435268.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value6E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.8755075221236
Replicate 30.43911276389525
Condition 2: 8 Hour
Replicate 10
Replicate 21.0653261257013
Replicate 31.015040362142
Condition 3: 24 Hour
Replicate 10
Replicate 20.1798715204472
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_435268.p1 GENE.S_Transcript_435268~~S_Transcript_435268.p1 ORF type:internal len:126 (+),score=23.33,Transferase|PF02458.11|4.2e-17 S_Transcript_435268:3-377(+)
CCAAAGGGGTATTTTGGGAATTCCATTTTTCATGCAAATTTGACAGCAAAAGCTGGTGACGTCATAAATAAGCCTTTAGGATTTGCTGCAAGTGAAGTTCACAAGGCATTGCAAAAAATGACTCATGTGGACTACTTAAGATCAGCCGTTGATTGCCTGGCAACGGTGCCTGATATAGGTGCTATAGCTCGTGGGCCCCGCAACTTTGGGTTTTTTGTCCTTTTGGTGAATACATGGGCCAGATTGCCCTTTGATGAAGTGGACTTTGGATGGGGAGGCCCTGTTTTTGGTGGCAATGGTGACATTGCATGTGAAGGCCAATGTTTCATCCTACAAAGCTTGTTGGTCACAGCTAAACTCTTTGCTCAACACATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_435268.p1 GENE.S_Transcript_435268~~S_Transcript_435268.p1 ORF type:internal len:126 (+),score=23.33,Transferase|PF02458.11|4.2e-17 S_Transcript_435268:3-377(+)
PKGYFGNSIFHANLTAKAGDVINKPLGFAASEVHKALQKMTHVDYLRSAVDCLATVPDIGAIARGPRNFGFFVLLVNTWARLPFDEVDFGWGGPVFGGNGDIACEGQCFILQSLLVTAKLFAQHM

Click here to download the sequence:
Link to NCBI Protein BLAST