Transcript Information: S_Transcript_43581.p1


Annotated TAIR IDAT5G09300.1
Annotated Gene NameThiamin diphosphate-binding fold (THDP-binding) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2884282-2886797 | Reverse length=472
E-Value8E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4528111737494
Replicate 22.5417960319717
Replicate 32.719666150577
Condition 2: 8 Hour
Replicate 12.0637474500451
Replicate 22.0619215336154
Replicate 32.8486616614952
Condition 3: 24 Hour
Replicate 18.1540809342771
Replicate 23.9687780640608
Replicate 34.184302297623


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_43581.p1 GENE.S_Transcript_43581~~S_Transcript_43581.p1 ORF type:3prime_partial len:217 (+),score=32.03,E1_dh|PF00676.16|1.5e-11 S_Transcript_43581:153-800(+)
ATGGCAGTTTGTTTTAGAAGATCAAGGCACATAATCAAGCATGCTTTGGCACCAAATTATCATGCTATTTCTAACAACATTACTACAAGTTTGCTAAGAACTAGTGATGATGTTGAAAAGTTGCCAAGAATACTATTAGTACGTAAAAACTCTTGTGAAAAATCCTCTGTTTTTTCCTCTGTTTTCTCTGTTTGGCCACGTTTTGAGTCTACAGAAGCTGCTCAAGTGAGGTTTGACCCCCAGTATTACACATCTGAGGATGATGACCATGATGATCTTTCTACCCAGGGGATGAATTTTCCTGGAGGCCGGGTTATATTTACACCCCAAATGAGTTTCATTGCGGAGTATGCTGAGAAGCGAGTACCTTGCTATCGAATTCTTAACAATCATGGCGAGACAGTTTCAGACGAAATTTATGAACAAGTGAGTCAAGATTTAGCAACAAGGATGTATGGTAGCATGGTGAGACTTCAGACTATGGACACAGTTCTGTATGAAGCACAACGGCAAGGCCGAGTTTCATTTTACGTCACTTCTTATGGGGAAGAAGCTATTAACATTGCCTCTGCAGCCGCCCTCTCTGAAGACGACATTGTCTTTGCTCAGTACAGGGAGCCAGGGGTGCTACTATGGCGTGGTTTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_43581.p1 GENE.S_Transcript_43581~~S_Transcript_43581.p1 ORF type:3prime_partial len:217 (+),score=32.03,E1_dh|PF00676.16|1.5e-11 S_Transcript_43581:153-800(+)
MAVCFRRSRHIIKHALAPNYHAISNNITTSLLRTSDDVEKLPRILLVRKNSCEKSSVFSSVFSVWPRFESTEAAQVRFDPQYYTSEDDDHDDLSTQGMNFPGGRVIFTPQMSFIAEYAEKRVPCYRILNNHGETVSDEIYEQVSQDLATRMYGSMVRLQTMDTVLYEAQRQGRVSFYVTSYGEEAINIASAAALSEDDIVFAQYREPGVLLWRGFT

Click here to download the sequence:
Link to NCBI Protein BLAST