Transcript Information: S_Transcript_435814.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18610490374252
Replicate 20
Replicate 30.51588072961121
Condition 2: 8 Hour
Replicate 10
Replicate 20.3128929879682
Replicate 30.14906187136351
Condition 3: 24 Hour
Replicate 10.15276142301115
Replicate 20
Replicate 30.17637793290291


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_435814.p1 GENE.S_Transcript_435814~~S_Transcript_435814.p1 ORF type:3prime_partial len:143 (+),score=16.79 S_Transcript_435814:51-428(+)
ATGAAGCACGAGGAGACTTATCGCAATTTTATTCGTCTCTTGAACGAGTCTCATGGTGATAACACTGATGTTCTCAAACATTTGATATACCTCAAGGCGGACAAGCTTCCCCTTCTTCGAGGTTCTACAGAATTACCGGTTGAAGAGCTAAAGGAAAAGAACGTACTACTACTAATCTCAGAGCTCAATATCCCCAATGAAGAGTTAAAGATCCTGGACCATATGTACAAAGAATCAAGATCACATTTACAATATGAAATTGTTTGGCTCCCAATAGTAGATAATTCCTTTCCTGCAAAAATGCTTGTCGCACTATCTTCATTTGGGGAAATATGGCTTTCCCCTTTGGAGACATGGTTAAGGAATCTCTTTGGAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_435814.p1 GENE.S_Transcript_435814~~S_Transcript_435814.p1 ORF type:3prime_partial len:143 (+),score=16.79 S_Transcript_435814:51-428(+)
MKHEETYRNFIRLLNESHGDNTDVLKHLIYLKADKLPLLRGSTELPVEELKEKNVLLLISELNIPNEELKILDHMYKESRSHLQYEIVWLPIVDNSFPAKMLVALSSFGEIWLSPLETWLRNLFGR

Click here to download the sequence:
Link to NCBI Protein BLAST