Transcript Information: S_Transcript_435815.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.58160155410363
Replicate 21.6270435374347
Replicate 30.38756086554511
Condition 3: 24 Hour
Replicate 10
Replicate 20.41206930138813
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_435815.p1 GENE.S_Transcript_435815~~S_Transcript_435815.p1 ORF type:5prime_partial len:110 (+),score=5.83,rve|PF00665.22|2.6e-06 S_Transcript_435815:2-331(+)
GATATTCTTTACAAGCGTGGTTTACTTGGTTCTATTACTAATTGTGATATTGATTTTTGCGAGCATTGTATTTATGGCAAGCAAAAGAAAGTAAGCTTCTCACCGGGTACTCATAGAACCAATGCAACTCTTGATTATGTCCACTCCGACTTGTGGGGTCCTTCACAAGTTGCCACCGTCGCAGGTAATCGCTATATGATGACTATTATTGATGATTACTCACGGAAAGTCTGGGTATATTTCTTGAAACACAAAAATGAGGCCCTGGACAAATTCAAAGAATGGAAAACCTTAATTGAGAATCAGACCGGGAAAAGCTTAAGAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_435815.p1 GENE.S_Transcript_435815~~S_Transcript_435815.p1 ORF type:5prime_partial len:110 (+),score=5.83,rve|PF00665.22|2.6e-06 S_Transcript_435815:2-331(+)
DILYKRGLLGSITNCDIDFCEHCIYGKQKKVSFSPGTHRTNATLDYVHSDLWGPSQVATVAGNRYMMTIIDDYSRKVWVYFLKHKNEALDKFKEWKTLIENQTGKSLRG*

Click here to download the sequence:
Link to NCBI Protein BLAST