Transcript Information: S_Transcript_435840.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeOrtholog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97662389853873
Replicate 21.0120545668585
Replicate 31.1843958952771
Condition 2: 8 Hour
Replicate 11.3695204790819
Replicate 21.2314779067739
Replicate 31.9555823490809
Condition 3: 24 Hour
Replicate 10.80164710057226
Replicate 21.871323891625
Replicate 30.46278980559846


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_435840.p1 GENE.S_Transcript_435840~~S_Transcript_435840.p1 ORF type:complete len:109 (+),score=25.29 S_Transcript_435840:85-411(+)
ATGGGGTATGGAAGACCTTATCCACCACCACCACGTCCACCCTTAGACCCTTACGGCCCACCGCCTCCACCACCACCTCCAGTTTACGGCCCACCGCCTCCAGCTTATGATCCATATCCACCTCCTCCGCGGGTCAACTATCAACATCACCATGCTCCTCCATCACATATTCATGGGCCACCAGGCCCACCACCTCCACCTCCTTACTACGCACCCCCACCGCCTCCCCCTTCTGGCCCACCTCCTCCTCCGTTCATAGATCCTTATGGCCCACATGCTCTTCGCCCTCGATATCGTCCTGGTCCGCCACCACCACCGCCATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_435840.p1 GENE.S_Transcript_435840~~S_Transcript_435840.p1 ORF type:complete len:109 (+),score=25.29 S_Transcript_435840:85-411(+)
MGYGRPYPPPPRPPLDPYGPPPPPPPPVYGPPPPAYDPYPPPPRVNYQHHHAPPSHIHGPPGPPPPPPYYAPPPPPPSGPPPPPFIDPYGPHALRPRYRPGPPPPPPY*

Click here to download the sequence:
Link to NCBI Protein BLAST